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Patrick Sahrmann
Patrick Sahrmann
Geverifieerd e-mailadres voor uchicago.edu
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OpenMSCG: A Software Tool for Bottom-Up Coarse-Graining
Y Peng, AJ Pak, AEP Durumeric, PG Sahrmann, S Mani, J Jin, TD Loose, ...
The Journal of Physical Chemistry B 127 (40), 8537-8550, 2023
332023
Utilizing machine learning to greatly expand the range and accuracy of bottom-up coarse-grained models through virtual particles
PG Sahrmann, TD Loose, AEP Durumeric, GA Voth
Journal of Chemical Theory and Computation 19 (14), 4402-4413, 2023
212023
Centroid molecular dynamics can be greatly accelerated through neural network learned centroid forces derived from path integral molecular dynamics
TD Loose, PG Sahrmann, GA Voth
Journal of Chemical Theory and Computation 18 (10), 5856-5863, 2022
142022
Coarse-graining with equivariant neural networks: A path toward accurate and data-efficient models
TD Loose*, PG Sahrmann*, TS Qu, GA Voth
The Journal of Physical Chemistry B 127 (49), 10564-10572, 2023
132023
MRP. py: A Parametrizer of Post-Translationally Modified Residues
PG Sahrmann, PH Donnan, KM Merz Jr, SO Mansoorabadi, DC Goodwin
Journal of Chemical Information and Modeling 60 (10), 4424-4428, 2020
42020
On the emergence of machine-learning methods in bottom-up coarse-graining
PG Sahrmann, GA Voth
Current Opinion in Structural Biology 90, 102972, 2025
12025
Entropy-based methods for formulating bottom-up ultra-coarse-grained models
PG Sahrmann, GA Voth
The Journal of Chemical Physics 162 (4), 2025
2025
Understanding the Coarse-grained Free Energy Landscape of Phospholipids and Their Phase Separation
PG Sahrmann, GA Voth
Biophysical Journal, 2024
2024
Enhancing the Assembly Properties of Bottom-Up Coarse-Grained Phospholipids
PG Sahrmann, GA Voth
Journal of Chemical Theory and Computation, 2024
2024
Changing Your Martini Can Still Give You a Hangover
TD Loose, PG Sahrmann, TS Qu, GA Voth
Journal of Chemical Theory and Computation 20 (20), 9190-9208, 2024
2024
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Artikelen 1–10