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Kai Blin
Kai Blin
Senior Researcher at the Novo Nordisk Foundation Center for Biosustainability
Geverifieerd e-mailadres voor biosustain.dtu.dk
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antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline
K Blin, S Shaw, K Steinke, R Villebro, N Ziemert, SY Lee, MH Medema, ...
Nucleic acids research 47 (W1), W81-W87, 2019
28832019
antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences
MH Medema, K Blin, P Cimermancic, V De Jager, P Zakrzewski, ...
Nucleic acids research 39 (suppl_2), W339-W346, 2011
22082011
antiSMASH 6.0: improving cluster detection and comparison capabilities
K Blin, S Shaw, AM Kloosterman, Z Charlop-Powers, GP Van Wezel, ...
Nucleic acids research 49 (W1), W29-W35, 2021
21992021
antiSMASH 3.0—a comprehensive resource for the genome mining of biosynthetic gene clusters
T Weber, K Blin, S Duddela, D Krug, HU Kim, R Bruccoleri, SY Lee, ...
Nucleic acids research 43 (W1), W237-W243, 2015
20922015
antiSMASH 4.0—improvements in chemistry prediction and gene cluster boundary identification
K Blin, T Wolf, MG Chevrette, X Lu, CJ Schwalen, SA Kautsar, ...
Nucleic acids research 45 (W1), W36-W41, 2017
12942017
antiSMASH 7.0: new and improved predictions for detection, regulation, chemical structures and visualisation
K Blin, S Shaw, HE Augustijn, ZL Reitz, F Biermann, M Alanjary, A Fetter, ...
Nucleic acids research 51 (W1), W46-W50, 2023
10512023
antiSMASH 2.0—a versatile platform for genome mining of secondary metabolite producers
K Blin, MH Medema, D Kazempour, MA Fischbach, R Breitling, E Takano, ...
Nucleic acids research 41 (W1), W204-W212, 2013
9862013
Minimum information about a biosynthetic gene cluster
MH Medema, R Kottmann, P Yilmaz, M Cummings, JB Biggins, K Blin, ...
Nature chemical biology 11 (9), 625-631, 2015
9312015
NRPSpredictor2—a web server for predicting NRPS adenylation domain specificity
M Röttig, MH Medema, K Blin, T Weber, C Rausch, O Kohlbacher
Nucleic acids research 39 (suppl_2), W362-W367, 2011
7432011
MIBiG 2.0: a repository for biosynthetic gene clusters of known function
SA Kautsar, K Blin, S Shaw, JC Navarro-Muñoz, BR Terlouw, ...
Nucleic acids research 48 (D1), D454-D458, 2020
6522020
Dissemination of antibiotic resistance genes from antibiotic producers to pathogens
X Jiang, MMH Ellabaan, P Charusanti, C Munck, K Blin, Y Tong, T Weber, ...
Nature communications 8 (1), 15784, 2017
3732017
MIBiG 3.0: a community-driven effort to annotate experimentally validated biosynthetic gene clusters
BR Terlouw, K Blin, JC Navarro-Munoz, NE Avalon, MG Chevrette, ...
Nucleic acids research 51 (D1), D603-D610, 2023
2822023
The antiSMASH database, a comprehensive database of microbial secondary metabolite biosynthetic gene clusters
K Blin, MH Medema, R Kottmann, SY Lee, T Weber
Nucleic acids research, gkw960, 2016
2812016
plantiSMASH: automated identification, annotation and expression analysis of plant biosynthetic gene clusters
SA Kautsar, HG Suarez Duran, K Blin, A Osbourn, MH Medema
Nucleic acids research 45 (W1), W55-W63, 2017
2722017
The Antibiotic Resistant Target Seeker (ARTS), an exploration engine for antibiotic cluster prioritization and novel drug target discovery
M Alanjary, B Kronmiller, M Adamek, K Blin, T Weber, D Huson, B Philmus, ...
Nucleic acids research 45 (W1), W42-W48, 2017
2112017
BiG-FAM: the biosynthetic gene cluster families database
SA Kautsar, K Blin, S Shaw, T Weber, MH Medema
Nucleic acids research 49 (D1), D490-D497, 2021
1922021
Recent development of antiSMASH and other computational approaches to mine secondary metabolite biosynthetic gene clusters
K Blin, HU Kim, MH Medema, T Weber
Briefings in Bioinformatics 20 (4), 1103-1113, 2019
1922019
The antiSMASH database version 2: a comprehensive resource on secondary metabolite biosynthetic gene clusters
K Blin, V Pascal Andreu, ELC de los Santos, F Del Carratore, SY Lee, ...
Nucleic acids research 47 (D1), D625-D630, 2019
1882019
Ten Simple Rules for Taking Advantage of git and GitHub
Y Perez-Riverol, L Gatto, R Wang, T Sachsenberg, J Uszkoreit, ...
PLOS Computational Biology, 2016
1882016
CRISPy-web: an online resource to design sgRNAs for CRISPR applications
K Blin, LE Pedersen, T Weber, SY Lee
Synthetic and Systems Biotechnology 1 (2), 118-121, 2016
1862016
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