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Omkar Mohite
Omkar Mohite
Senior Bioinformatician, Bactobio Ltd.
Geverifieerd e-mailadres voor bacto.bio - Homepage
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Phylogenetic distribution of secondary metabolites in the Bacillus subtilis species complex
K Steinke, OS Mohite, T Weber, ÁT Kovács
Msystems 6 (2), 10.1128/msystems. 00057-21, 2021
662021
Genome‐Scale Metabolic Reconstruction of Actinomycetes for Antibiotics Production
OS Mohite, T Weber, HU Kim, SY Lee
Biotechnology Journal 14 (1), 1800377, 2019
282019
Pangenome analysis reveals the genetic basis for taxonomic classification of the Lactobacillaceae family
A Rajput, SM Chauhan, OS Mohite, JC Hyun, O Ardalani, LJ Jahn, ...
Food microbiology 115, 104334, 2023
232023
Long-read metagenome-assembled genomes improve identification of novel complete biosynthetic gene clusters in a complex microbial activated sludge ecosystem
R Sánchez-Navarro, M Nuhamunada, OS Mohite, K Wasmund, ...
Msystems 7 (6), e00632-22, 2022
232022
Pangenome analysis of Enterobacteria reveals richness of secondary metabolite gene clusters and their associated gene sets
OS Mohite, CJ Lloyd, JM Monk, T Weber, BO Palsson
Synthetic and Systems Biotechnology 7 (3), 900-910, 2022
232022
Characterization and engineering of Streptomyces griseofuscus DSM 40191 as a potential host for heterologous expression of biosynthetic gene clusters
T Gren, CM Whitford, OS Mohite, TS Jørgensen, EE Kontou, JB Nielsen, ...
Scientific Reports 11 (1), 18301, 2021
192021
UmetaFlow: an untargeted metabolomics workflow for high-throughput data processing and analysis
EE Kontou, A Walter, O Alka, J Pfeuffer, T Sachsenberg, OS Mohite, ...
Journal of Cheminformatics 15 (1), 52, 2023
182023
Activation and Identification of a Griseusin Cluster in Streptomyces sp. CA-256286 by Employing Transcriptional Regulators and Multi-Omics Methods
C Beck, T Gren, FJ Ortiz-López, TS Jørgensen, D Carretero-Molina, ...
Molecules 26 (21), 6580, 2021
162021
BGCFlow: systematic pangenome workflow for the analysis of biosynthetic gene clusters across large genomic datasets
M Nuhamunada, OS Mohite, PV Phaneuf, BO Palsson, T Weber
Nucleic Acids Research 52 (10), 5478-5495, 2024
152024
Metabolite systems profiling identifies exploitable weaknesses in retinoblastoma
S Sahoo, RK Ravi Kumar, B Nicolay, O Mohite, K Sivaraman, V Khetan, ...
FEBS letters 593 (1), 23-41, 2019
152019
High-quality genome-scale metabolic network reconstruction of probiotic bacterium Escherichia coli Nissle 1917
M van ‘t Hof, OS Mohite, JM Monk, T Weber, BO Palsson, MOA Sommer
BMC bioinformatics 23 (1), 566, 2022
112022
Computational prediction of synthetic lethals in genome-scale metabolic models using Fast-SL
K Raman, A Pratapa, O Mohite, S Balachandran
Metabolic network reconstruction and modeling: methods and protocols, 315-336, 2018
72018
Phylogenetic distribution of secondary metabolites in the Bacillus subtilis species complex. mSystems. 2021; 6
K Steinke, OS Mohite, T Weber, ÁT Kovács
7
A treasure trove of 1034 actinomycete genomes
TS Jørgensen, OS Mohite, EB Sterndorff, M Alvarez-Arevalo, K Blin, ...
Nucleic Acids Research 52 (13), 7487-7503, 2024
62024
Identification of the Biosynthetic Gene Cluster for Pyracrimycin A, an Antibiotic Produced by Streptomyces sp.
JB Nielsen, T Gren, OS Mohite, TS Jørgensen, AK Klitgaard, ...
ACS chemical biology 17 (9), 2411-2417, 2022
52022
Pangenome reconstruction of Lactobacillaceae metabolism predicts species-specific metabolic traits
O Ardalani, PV Phaneuf, OS Mohite, LK Nielsen, BO Palsson
Msystems 9 (7), e00156-24, 2024
42024
Pangenome mining of the Streptomyces genus redefines their biosynthetic potential
OS Mohite, TS Jørgensen, T Booth, P Charusanti, PV Phaneuf, T Weber, ...
bioRxiv, 2024.02. 20.581055, 2024
22024
Genomic insights into Lactobacillaceae: Analyzing the “Alleleome” of core pangenomes for enhanced understanding of strain diversity and revealing Phylogroup …
AS Harke, J Josephs-Spauling, OS Mohite, SM Chauhan, O Ardalani, ...
bioRxiv, 2023.09. 22.558971, 2023
22023
Pangenome mining of the Streptomyces genus redefines species’ biosynthetic potential
OS Mohite, TS Jørgensen, TJ Booth, P Charusanti, PV Phaneuf, T Weber, ...
Genome Biology 26 (1), 9, 2025
12025
PanKB: An interactive microbial pangenome knowledgebase for research, biotechnological innovation, and knowledge mining
B Sun, L Pashkova, PA Pieters, AS Harke, OS Mohite, A Santos, ...
Nucleic Acids Research 53 (D1), D806-D818, 2025
12025
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