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Olivier Fedrigo
Olivier Fedrigo
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Towards complete and error-free genome assemblies of all vertebrate species
A Rhie, SA McCarthy, O Fedrigo, J Damas, G Formenti, S Koren, ...
Nature 592 (7856), 737-746, 2021
22422021
The Genome of the Sea Urchin Strongylocentrotus purpuratus
E Sodergren, GM Weinstock, EH Davidson, RA Cameron, RA Gibbs, ...
Science 314 (5801), 941-952, 2006
12812006
A draft human pangenome reference
WW Liao, M Asri, J Ebler, D Doerr, M Haukness, G Hickey, S Lu, JK Lucas, ...
Nature 617 (7960), 312-324, 2023
6462023
Gfastats: conversion, evaluation and manipulation of genome sequences using assembly graphs
G Formenti, L Abueg, A Brajuka, N Brajuka, C Gallardo-Alba, A Giani, ...
Bioinformatics 38 (17), 4214-4216, 2022
3702022
Promoter regions of many neural-and nutrition-related genes have experienced positive selection during human evolution
R Haygood, O Fedrigo, B Hanson, KD Yokoyama, G Wray
Nature Precedings, 1-1, 2007
3692007
Haplotype-resolved assembly of diploid genomes without parental data
H Cheng, ED Jarvis, O Fedrigo, KP Koepfli, L Urban, NJ Gemmell, H Li
Nature biotechnology 40 (9), 1332-1335, 2022
3512022
Single-cell isoform RNA sequencing characterizes isoforms in thousands of cerebellar cells
I Gupta, PG Collier, B Haase, A Mahfouz, A Joglekar, T Floyd, ...
Nature biotechnology 36 (12), 1197-1202, 2018
3292018
Six reference-quality genomes reveal evolution of bat adaptations
D Jebb, Z Huang, M Pippel, GM Hughes, K Lavrichenko, P Devanna, ...
Nature 583 (7817), 578-584, 2020
3042020
The earth BioGenome project 2020: Starting the clock
HA Lewin, S Richards, E Lieberman Aiden, ML Allende, JM Archibald, ...
Proceedings of the National Academy of Sciences 119 (4), e2115635118, 2022
2462022
The era of reference genomes in conservation genomics
G Formenti, K Theissinger, C Fernandes, I Bista, A Bombarely, C Bleidorn, ...
Trends in ecology & evolution 37 (3), 197-202, 2022
2382022
Reading frame correction by targeted genome editing restores dystrophin expression in cells from Duchenne muscular dystrophy patients
DG Ousterout, P Perez-Pinera, PI Thakore, AM Kabadi, MT Brown, X Qin, ...
Molecular Therapy 21 (9), 1718-1726, 2013
2342013
How genomics can help biodiversity conservation
K Theissinger, C Fernandes, G Formenti, I Bista, PR Berg, C Bleidorn, ...
Trends in genetics 39 (7), 545-559, 2023
1932023
Phylogenetic relationships among the major lineages of modern elasmobranchs
GJP Naylor, JA Ryburn, O Fedrigo, JA Lopez
Reproductive biology and phylogeny of Chondrichthyes, 1-25, 2011
1912011
Population genomics of the critically endangered kākāpō
N Dussex, T Van Der Valk, HE Morales, CW Wheat, D Díez-del-Molino, ...
Cell Genomics 1 (1), 2021
1752021
A spatially resolved brain region-and cell type-specific isoform atlas of the postnatal mouse brain
A Joglekar, A Prjibelski, A Mahfouz, P Collier, S Lin, AK Schlusche, ...
Nature communications 12 (1), 463, 2021
1742021
Extensive evolutionary changes in regulatory element activity during human origins are associated with altered gene expression and positive selection
Y Shibata, NC Sheffield, O Fedrigo, CC Babbitt, M Wortham, AK Tewari, ...
PLoS genetics 8 (6), e1002789, 2012
1642012
Semi-automated assembly of high-quality diploid human reference genomes
ED Jarvis, G Formenti, A Rhie, A Guarracino, C Yang, J Wood, A Tracey, ...
Nature 611 (7936), 519-531, 2022
1532022
Platypus and echidna genomes reveal mammalian biology and evolution
Y Zhou, L Shearwin-Whyatt, J Li, Z Song, T Hayakawa, D Stevens, ...
Nature 592 (7856), 756-762, 2021
1412021
Extended haplotype-phasing of long-read de novo genome assemblies using Hi-C
ZN Kronenberg, A Rhie, S Koren, GT Concepcion, P Peluso, KM Munson, ...
Nature communications 12 (1), 1935, 2021
1372021
Contrasts between adaptive coding and noncoding changes during human evolution
R Haygood, CC Babbitt, O Fedrigo, GA Wray
Proceedings of the National Academy of Sciences 107 (17), 7853-7857, 2010
1372010
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Artikler 1–20