| Hierarchical social networks shape gut microbial composition in wild Verreaux's sifaka AC Perofsky, RJ Lewis, LA Abondano, A Di Fiore, LA Meyers Proceedings of the Royal Society B: Biological Sciences 284 (1868), 20172274, 2017 | 135 | 2017 |
| Terrestriality and bacterial transfer: A comparative study of gut microbiomes in sympatric Malagasy mammals AC Perofsky, RJ Lewis, LA Meyers The ISME Journal, 2018 | 93 | 2018 |
| Social groups constrain the spatiotemporal dynamics of wild sifaka gut microbiomes AC Perofsky, L Ancel Meyers, LA Abondano, A Di Fiore, RJ Lewis Molecular ecology 30 (24), 6759-6775, 2021 | 40 | 2021 |
| Beyond clinical trials: Evolutionary and epidemiological considerations for development of a universal influenza vaccine C Viboud, K Gostic, MI Nelson, GE Price, A Perofsky, K Sun, ... PLoS Pathogens 16 (9), e1008583, 2020 | 30 | 2020 |
| Evaluation of FluSight influenza forecasting in the 2021–22 and 2022–23 seasons with a new target laboratory-confirmed influenza hospitalizations SM Mathis, AE Webber, TM León, EL Murray, M Sun, LA White, LC Brooks, ... Nature communications 15 (1), 6289, 2024 | 20 | 2024 |
| Impacts of human mobility on the citywide transmission dynamics of 18 respiratory viruses in pre-and post-COVID-19 pandemic years AC Perofsky, CL Hansen, R Burstein, S Boyle, R Prentice, C Marshall, ... Nature communications 15 (1), 4164, 2024 | 17 | 2024 |
| Wetland cover dynamics drive hemorrhagic disease patterns in white-tailed deer in the United States BS Berry, K Magori, AC Perofsky, DE Stallknecht, AW Park Journal of wildlife diseases 49 (3), 501-509, 2013 | 17 | 2013 |
| A heterogeneous swine show circuit drives zoonotic transmission of influenza A viruses in the United States MI Nelson, A Perofsky, DS McBride, BL Rambo-Martin, MM Wilson, ... Journal of Virology 94 (24), 10.1128/jvi. 01453-20, 2020 | 15 | 2020 |
| Direct and indirect effects of the coronavirus disease 2019 pandemic on private healthcare utilization in South Africa, March 2020–September 2021 AC Perofsky, S Tempia, J Bingham, C Maslo, M Toubkin, A Laubscher, ... Clinical Infectious Diseases 75 (1), e1000-e1010, 2022 | 14 | 2022 |
| Trends in risk factors and symptoms associated with SARS-CoV-2 and rhinovirus test positivity in King County, Washington, June 2020 to July 2022 C Hansen, AC Perofsky, R Burstein, M Famulare, S Boyle, R Prentice, ... JAMA network open 5 (12), e2245861-e2245861, 2022 | 12 | 2022 |
| Tracing the source of influenza A virus zoonoses in interconnected circuits of swine exhibitions DS McBride, AC Perofsky, JM Nolting, MI Nelson, AS Bowman The Journal of Infectious Diseases 224 (3), 458-468, 2021 | 11 | 2021 |
| The challenges of vaccine strain selection AC Perofsky, MI Nelson Elife 9, e62955, 2020 | 10 | 2020 |
| Local-scale phylodynamics reveal differential community impact of SARS-CoV-2 in a metropolitan US county MI Paredes, AC Perofsky, L Frisbie, LH Moncla, P Roychoudhury, H Xie, ... PLoS Pathogens 20 (3), e1012117, 2024 | 9 | 2024 |
| Antigenic drift and subtype interference shape A (H3N2) epidemic dynamics in the United States AC Perofsky, J Huddleston, CL Hansen, JR Barnes, T Rowe, X Xu, ... Elife 13, RP91849, 2024 | 6 | 2024 |
| Characterization of the Tree Holes Used by Lepilemur ruficaudatus in the Dry, Deciduous Forest of Kirindy Mitea National Park EJ Rakotomalala, F Rakotondraparany, AC Perofsky, RJ Lewis Folia Primatologica 88 (1), 28-41, 2017 | 6 | 2017 |
| Trends in risk factors and symptoms associated with SARS-CoV-2 and Rhinovirus test positivity in King County, Washington: A Test-Negative Design Study of the Greater Seattle … CL Hansen, A Perofsky, R Burstein, M Famulare, S Boyle, R Prentice, ... medRxiv, 2022.08. 12.22278203, 2022 | 2 | 2022 |
| Data and model needs for generalizable inferences linking human mobility and infectious disease transmission N Kostandova, R Corgel, S Bansal, S Bérubé, E Cleary, C Hansen, ... OSF, 2024 | 1 | 2024 |
| Human mobility impacts the transmission of common respiratory viruses: A modeling study of the Seattle metropolitan area AC Perofsky, C Hansen, R Burstein, S Boyle, R Prentice, C Marshall, ... medRxiv, 2023.10. 31.23297868, 2023 | 1 | 2023 |
| Ecological, evolutionary, and behavioral determinants of gut microbiomes in Malagasy mammals AC Perofsky | 1 | 2018 |
| Fine-scale spatial and social patterns of SARS-CoV-2 transmission from identical pathogen sequences C Tran-Kiem, MI Paredes, AC Perofsky, LA Frisbie, H Xie, K Kong, ... medRxiv, 2024 | | 2024 |