| Optimization of experimental parameters in data-independent mass spectrometry significantly increases depth and reproducibility of results R Bruderer, OM Bernhardt, T Gandhi, Y Xuan, J Sondermann, M Schmidt, ... Molecular & Cellular Proteomics 16 (12), 2296-2309, 2017 | 458 | 2017 |
| Multiplexed peptide analysis using data-independent acquisition and Skyline JD Egertson, B MacLean, R Johnson, Y Xuan, MJ MacCoss Nature protocols 10 (6), 887-903, 2015 | 246 | 2015 |
| Advancing urinary protein biomarker discovery by data-independent acquisition on a quadrupole-orbitrap mass spectrometer J Muntel, Y Xuan, ST Berger, L Reiter, R Bachur, A Kentsis, H Steen Journal of proteome research 14 (11), 4752-4762, 2015 | 142 | 2015 |
| Ultra-fast label-free quantification and comprehensive proteome coverage with narrow-window data-independent acquisition UH Guzman, A Martinez-Val, Z Ye, E Damoc, TN Arrey, A Pashkova, ... Nature biotechnology 42 (12), 1855-1866, 2024 | 103 | 2024 |
| Separation and identification of phytosiderophores and their metal complexes in plants by zwitterionic hydrophilic interaction liquid chromatography coupled to electrospray … Y Xuan, EB Scheuermann, AR Meda, H Hayen, N von Wirén, G Weber Journal of Chromatography A 1136 (1), 73-81, 2006 | 94 | 2006 |
| High‐field asymmetric waveform ion mobility spectrometry (FAIMS) coupled with high‐resolution electron transfer dissociation mass spectrometry for the analysis of isobaric … Y Xuan, AJ Creese, JA Horner, HJ Cooper Rapid Communications in Mass Spectrometry: An International Journal Devoted …, 2009 | 91 | 2009 |
| DPHL: a DIA pan-human protein mass spectrometry library for robust biomarker discovery T Zhu, Y Zhu, Y Xuan, H Gao, X Cai, SR Piersma, TV Pham, T Schelfhorst, ... Genomics, proteomics & bioinformatics 18 (2), 104-119, 2020 | 77 | 2020 |
| Combining precursor and fragment information for improved detection of differential abundance in data independent acquisition T Huang, R Bruderer, J Muntel, Y Xuan, O Vitek, L Reiter Molecular & Cellular Proteomics 19 (2), 421-430, 2020 | 69 | 2020 |
| Standardization and harmonization of distributed multi-center proteotype analysis supporting precision medicine studies Y Xuan, NW Bateman, S Gallien, S Goetze, Y Zhou, P Navarro, M Hu, ... Nature communications 11 (1), 5248, 2020 | 67 | 2020 |
| A cost-effective high-throughput plasma and serum proteomics workflow enables mapping of the molecular impact of total pancreatectomy with islet autotransplantation TB Bennike, MD Bellin, Y Xuan, A Stensballe, FT Møller, GJ Beilman, ... Journal of proteome research 17 (5), 1983-1992, 2018 | 43 | 2018 |
| Hybrid-DIA: intelligent data acquisition integrates targeted and discovery proteomics to analyze phospho-signaling in single spheroids A Martínez-Val, K Fort, C Koenig, L Van der Hoeven, G Franciosa, ... Nature communications 14 (1), 3599, 2023 | 32 | 2023 |
| Studying ultra-complex crude oil mixtures by using high-field asymmetric waveform ion mobility spectrometry (FAIMS) coupled to an electrospray ionisation-LTQ-Orbitrap mass … W Schrader, Y Xuan, A Gaspar European Journal of Mass Spectrometry 20 (1), 43-49, 2014 | 26 | 2014 |
| Narrow-window DIA: Ultra-fast quantitative analysis of comprehensive proteomes with high sequencing depth UH Guzman, A Martinez Del Val, Z Ye, E Damoc, TN Arrey, A Pashkova, ... BioRxiv, 2023.06. 02.543374, 2023 | 21 | 2023 |
| Quantitative assessment of the contribution of high resolution mass spectrometric analysis to the reliability of compound confirmation G Stoev, Y Xuan, M Peycheva, M Scigelova Talanta 98, 19-27, 2012 | 20 | 2012 |
| CE of phytosiderophores and related metal species in plants Y Xuan, EB Scheuermann, AR Meda, P Jacob, N von Wirén, G Weber Electrophoresis 28 (19), 3507-3519, 2007 | 20 | 2007 |
| Construction and analytical application of an on-column photo reactor for improved detection of iron-species as plant metabolites in capillary flow injection and capillary … Y Xuan, G Weber, A Manz Journal of Chromatography A 1130 (2), 212-218, 2006 | 15 | 2006 |
| Intact antibody characterization using orbitrap mass spectrometry Z Hao, T Zhang, Y Xuan, H Wang, J Qian, S Lin, J Chen, DM Horn, ... State-of-the-art and emerging technologies for therapeutic monoclonal …, 2015 | 12 | 2015 |
| Monoclonal Antibody and Related Product Characterization Under Native Conditions Using a Benchtop Mass Spectrometer Y Xuan, F Debaene, J Stojko, A Beck, A Van Dorsselaer, S Cianférani, ... Thermo Fisher Poster, 2014 | 7 | 2014 |
| WITHDRAWN: Heralds of parallel MS: Data-independent acquisition surpassing sequential identification of data dependent acquisition in proteomics. R Bruderer, OM Bernhardt, T Gandhi, Y Xuan, J Sondermann, M Schmidt, ... Molecular & Cellular Proteomics: MCP, mcp. M116. 065730-mcp. M116. 065730, 2017 | 5 | 2017 |
| Simultaneous targeted and discovery-driven clinical proteotyping using hybrid-PRM/DIA S Goetze, A van Drogen, JB Albinus, KL Fort, T Gandhi, D Robbiani, ... Clinical Proteomics 21 (1), 26, 2024 | 3 | 2024 |
