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Krishna Shrinivas
Krishna Shrinivas
Assistant Professor, Northwestern University
Verifisert e-postadresse på northwestern.edu - Startside
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Coactivator condensation at super-enhancers links phase separation and gene control
BR Sabari, A Dall’Agnese, A Boija, IA Klein, EL Coffey, K Shrinivas, ...
Science 361 (6400), eaar3958, 2018
21962018
A phase separation model for transcriptional control
D Hnisz*, K Shrinivas*, RA Young, AK Chakraborty, PA Sharp
Cell 169 (1), 13-23, 2017
16502017
Transcription factors activate genes through the phase-separation capacity of their activation domains
A Boija, IA Klein, BR Sabari, A Dall’Agnese, EL Coffey, AV Zamudio, ...
Cell 175 (7), 1842-1855. e16, 2018
15902018
Pol II phosphorylation regulates a switch between transcriptional and splicing condensates
YE Guo, JC Manteiga, JE Henninger, BR Sabari, A Dall’Agnese, ...
Nature 572 (7770), 543-548, 2019
5952019
RNA-mediated feedback control of transcriptional condensates
JE Henninger*, O Oksuz*, K Shrinivas*, I Sagi, G LeRoy, MM Zheng, ...
Cell 184 (1), 207-225. e24, 2021
4582021
Partitioning of cancer therapeutics in nuclear condensates
IA Klein, A Boija, LK Afeyan, SW Hawken, M Fan, A Dall'Agnese, O Oksuz, ...
Science 368 (6497), 1386-1392, 2020
3972020
Enhancer features that drive formation of transcriptional condensates
K Shrinivas*, BR Sabari*, EL Coffey, IA Klein, A Boija, AV Zamudio, ...
Molecular Cell 75 (3), 549-561. e7, 2019
3882019
Phase separation in fluids with many interacting components
K Shrinivas, MP Brenner
Proceedings of the National Academy of Sciences 118 (45), e2108551118, 2021
602021
Evolution of weak cooperative interactions for biological specificity
A Gao*, K Shrinivas*, P Lepeudry, HI Suzuki, PA Sharp, AK Chakraborty
Proceedings of the National Academy of Sciences 115 (47), E11053-E11060, 2018
522018
A model for organization and regulation of nuclear condensates by gene activity
HH Schede, P Natarajan, AK Chakraborty, K Shrinivas
Nature communications 14 (1), 4152, 2023
192023
A stochastic chemical dynamic approach to correlate autoimmunity and optimal vitamin-D range
S Roy, K Shrinivas, B Bagchi
PLoS One 9 (6), e100635, 2014
192014
A model for cis-regulation of transcriptional condensates and gene expression by proximal lncRNAs
P Natarajan, K Shrinivas, AK Chakraborty
Biophysical Journal 122 (13), 2757-2772, 2023
102023
The phosphatidylinositol-transfer protein Nir3 promotes PI(4,5)P2 replenishment in response to TCR signaling during T cell development and survival
W Lu, YA Helou, K Shrinivas, J Liou, BB Au-Yeung, A Weiss
Nature immunology 24 (1), 136-147, 2023
102023
Prediction of Reactivity Ratios in Free Radical Copolymerization from Monomer Resonance–Polarity (Q–e) Parameters: Genetic Programming-Based Models
K Shrinivas, RP Kulkarni, S Shaikh, RV Ghorpade, R Vyas, SS Tambe, ...
International Journal of Chemical Reactor Engineering 14 (1), 361-372, 2016
52016
Methods and assays for modulating gene transcription by modulating condensates
RA Young, PA Sharp, AK Chakraborty, A Dall'Agnese, K Shrinivas, ...
US Patent App. 17/040,967, 2022
32022
Generalized design of sequence-ensemble-function relationships for intrinsically disordered proteins
R Krueger, MP Brenner, K Shrinivas
bioRxiv, 2024.10. 10.617695, 2024
12024
Multiphase coexistence capacity in complex fluids
K Shrinivas, MP Brenner
bioRxiv, 2022
12022
Learning and Inference in a Lattice Model of Multicomponent Condensates
C Chalk, S Buse, K Shrinivas, A Murugan, E Winfree
30th International Conference on DNA Computing and Molecular Programming …, 2024
2024
Dewdrops on the genome: Regulation of gene expression by biomolecular phase separation
K Shrinivas
Massachusetts Institute of Technology, 2020
2020
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Artikler 1–19