dbAMP 2.0: updated resource for antimicrobial peptides with an enhanced scanning method for genomic and proteomic data JH Jhong, L Yao, Y Pang, Z Li, CR Chung, R Wang, S Li, W Li, M Luo, ... Nucleic acids research 50 (D1), D460-D470, 2022 | 118 | 2022 |
Precise antibody-independent m6A identification via 4SedTTP-involved and FTO-assisted strategy at single-nucleotide resolution T Hong, Y Yuan, Z Chen, K Xi, T Wang, Y Xie, Z He, H Su, Y Zhou, ZJ Tan, ... Journal of the American Chemical Society 140 (18), 5886-5889, 2018 | 70 | 2018 |
Competitive binding of Mg2+ and Na+ ions to nucleic acids: from helices to tertiary structures K Xi, FH Wang, G Xiong, ZL Zhang, ZJ Tan Biophysical journal 114 (8), 1776-1790, 2018 | 69 | 2018 |
Discovery of an orally active VHL-recruiting PROTAC that achieves robust HMGCR degradation and potent hypolipidemic activity in vivo G Luo, Z Li, X Lin, X Li, Y Chen, K Xi, M Xiao, H Wei, L Zhu, H Xiang Acta Pharmaceutica Sinica B 11 (5), 1300-1314, 2021 | 65 | 2021 |
Divalent ion-mediated DNA-DNA interactions: a comparative study of triplex and duplex ZL Zhang, YY Wu, K Xi, JP Sang, ZJ Tan Biophysical journal 113 (3), 517-528, 2017 | 46 | 2017 |
Structural flexibility of DNA-RNA hybrid duplex: stretching and twist-stretch coupling JH Liu, K Xi, X Zhang, L Bao, X Zhang, ZJ Tan Biophysical journal 117 (1), 74-86, 2019 | 44 | 2019 |
Discovery of novel quinazoline derivatives as potent PI3Kδ inhibitors with high selectivity Y Teng, X Li, S Ren, Y Cheng, K Xi, H Shen, W Ma, G Luo, H Xiang European Journal of Medicinal Chemistry 208, 112865, 2020 | 18 | 2020 |
Assessing the performance of traveling-salesman based automated path searching (TAPS) on complex biomolecular systems K Xi, Z Hu, Q Wu, M Wei, R Qian, L Zhu Journal of Chemical Theory and Computation 17 (8), 5301-5311, 2021 | 8 | 2021 |
DNA deformation exerted by regulatory DNA-binding motifs in human alkyladenine DNA glycosylase promotes base flipping L Wang, K Xi, L Zhu, LT Da Journal of Chemical Information and Modeling 62 (13), 3213-3226, 2022 | 7 | 2022 |
To what extent of ion neutralization can multivalent ion distributions around RNA-like macroions be described by Poisson–Boltzmann theory? G Xiong, K Xi, X Zhang, ZJ Tan Chinese Physics B 27 (1), 018203, 2018 | 4 | 2018 |
Automated path searching reveals the mechanism of hydrolysis enhancement by T4 lysozyme mutants K Xi, L Zhu International Journal of Molecular Sciences 23 (23), 14628, 2022 | 3 | 2022 |
Molecular dynamics simulations on DNA flexibility: A comparative study of Amber bsc1 and bsc0 force fields X Kai-Xin, X Kun, B Lei, Z Zhong-Liang, T Zhi-Jie ACTA PHYSICA SINICA 67 (10), 2018 | 3 | 2018 |
Molecular insights into the activation mechanism of GPR156 in maintaining auditory function X Ma, LN Chen, M Liao, L Zhang, K Xi, J Guo, C Shen, DD Shen, P Cai, ... Nature Communications 15 (1), 1-16, 2024 | 2 | 2024 |
Recognition of RNA secondary structures with a programmable peptide nucleic acid-based platform R Lu, L Deng, Y Lian, X Ke, L Yang, K Xi, AAL Ong, Y Chen, H Zhou, ... Cell Reports Physical Science 5 (9), 2024 | 1 | 2024 |
Exploring the dynamic variations of viral genomes via a novel genetic network Y Zhang, J Wen, K Xi, Q Pan Molecular Phylogenetics and Evolution 175, 107583, 2022 | 1 | 2022 |
Structural basis of orientated asymmetry in a mGlu heterodimer W Huang, N Jin, J Guo, C Shen, C Xu, K Xi, L Bonhomme, RB Quast, ... Nature Communications 15 (1), 10345, 2024 | | 2024 |
Molecular insights into the atypical activation mechanism of GPR156 in maintaining auditory function X Ma, LN Chen, M Liao, L Zhang, K Xi, J Guo, C Shen, DD Shen, P Cai, ... bioRxiv, 2024.03. 07.581839, 2024 | | 2024 |
Transition state searching for complex biomolecules: Algorithms and machine learning JY Yang, X Kun, LZ Zhu ACTA PHYSICA SINICA 72 (24), 2023 | | 2023 |
TAPS: A Traveling-Salesman Based Automated Path Searching Method for Functional Dynamics of Complex Biomolecular Systems K Xi, L Zhu A Practical Guide to Recent Advances in Multiscale Modeling and Simulation …, 2023 | | 2023 |