Allostery in its many disguises: from theory to applications SJ Wodak, E Paci, NV Dokholyan, IN Berezovsky, A Horovitz, J Li, ... Structure 27 (4), 566-578, 2019 | 340 | 2019 |
Crucial role of nonspecific interactions in amyloid nucleation A Šarić, YC Chebaro, TPJ Knowles, D Frenkel Proceedings of the National Academy of Sciences 111 (50), 17869-17874, 2014 | 182 | 2014 |
The OPEP protein model: from single molecules, amyloid formation, crowding and hydrodynamics to DNA/RNA systems F Sterpone, S Melchionna, P Tuffery, S Pasquali, N Mousseau, ... Chemical Society Reviews 43 (13), 4871-4893, 2014 | 165 | 2014 |
The coarse-grained OPEP force field for non-amyloid and amyloid proteins Y Chebaro, S Pasquali, P Derreumaux The Journal of Physical Chemistry B 116 (30), 8741-8752, 2012 | 119 | 2012 |
Structures and Thermodynamics of Alzheimer’s Amyloid-β Aβ (16− 35) Monomer and Dimer by Replica Exchange Molecular Dynamics Simulations: Implication for Full-Length Aβ Fibrillation Y Chebaro, N Mousseau, P Derreumaux The Journal of Physical Chemistry B 113 (21), 7668-7675, 2009 | 116 | 2009 |
Intrinsically disordered energy landscapes Y Chebaro, AJ Ballard, D Chakraborty, DJ Wales Scientific reports 5 (1), 10386, 2015 | 114 | 2015 |
Structures of Aβ17–42 trimers in isolation and with five small-molecule drugs using a hierarchical computational procedure Y Chebaro, P Jiang, T Zang, Y Mu, PH Nguyen, N Mousseau, ... The Journal of Physical Chemistry B 116 (29), 8412-8422, 2012 | 112 | 2012 |
Replica exchange molecular dynamics simulations of coarse-grained proteins in implicit solvent Y Chebaro, X Dong, R Laghaei, P Derreumaux, N Mousseau The Journal of Physical Chemistry B 113 (1), 267-274, 2008 | 90 | 2008 |
Targeting the early steps of Aβ16–22 protofibril disassembly by N‐methylated inhibitors: A numerical study Y Chebaro, P Derreumaux Proteins: Structure, Function, and Bioinformatics 75 (2), 442-452, 2009 | 70 | 2009 |
The asymmetric binding of PGC-1α to the ERRα and ERRγ nuclear receptor homodimers involves a similar recognition mechanism M Takacs, MV Petoukhov, RA Atkinson, P Roblin, FX Ogi, B Demeler, ... PloS one 8 (7), e67810, 2013 | 51 | 2013 |
The molecular mechanisms underlying the ERα-36-mediated signaling in breast cancer S Omarjee, J Jacquemetton, C Poulard, N Rochel, A Dejaegere, ... Oncogene 36 (18), 2503-2514, 2017 | 50 | 2017 |
The Conversion of Helix H2 to β-Sheet Is Accelerated in the Monomer and Dimer of the Prion Protein upon T183A Mutation Y Chebaro, P Derreumaux The Journal of Physical Chemistry B 113 (19), 6942-6948, 2009 | 50 | 2009 |
Structural basis for DNA gyrase interaction with coumermycin A1 A Vanden Broeck, AG McEwen, Y Chebaro, N Potier, V Lamour Journal of Medicinal Chemistry 62 (8), 4225-4231, 2019 | 46 | 2019 |
Targeting the two oncogenic functional sites of the HPV E6 oncoprotein with a high‐affinity bivalent ligand J Ramirez, J Poirson, C Foltz, Y Chebaro, M Schrapp, A Meyer, A Bonetta, ... Angewandte Chemie 127 (27), 8069-8073, 2015 | 42 | 2015 |
Phosphorylation of the retinoic acid receptor alpha induces a mechanical allosteric regulation and changes in internal dynamics Y Chebaro, I Amal, N Rochel, C Rochette-Egly, RH Stote, A Dejaegere PLoS computational biology 9 (4), e1003012, 2013 | 37 | 2013 |
Substitutions at residue 211 in the prion protein drive a switch between CJD and GSS syndrome, a new mechanism governing inherited neurodegenerative disorders K Peoc'h, E Levavasseur, E Delmont, A De Simone, I Laffont-Proust, ... Human molecular genetics 21 (26), 5417-5428, 2012 | 35 | 2012 |
Structural basis for the accommodation of bis-and tris-aromatic derivatives in vitamin D nuclear receptor F Ciesielski, Y Sato, Y Chebaro, D Moras, A Dejaegere, N Rochel Journal of medicinal chemistry 55 (19), 8440-8449, 2012 | 31 | 2012 |
NR3E receptors in cnidarians: A new family of steroid receptor relatives extends the possible mechanisms for ligand binding K Khalturin, IML Billas, Y Chebaro, AM Reitzel, AM Tarrant, V Laudet, ... The Journal of steroid biochemistry and molecular biology 184, 11-19, 2018 | 21 | 2018 |
BpForms and BcForms: a toolkit for concretely describing non-canonical polymers and complexes to facilitate global biochemical networks PF Lang, Y Chebaro, X Zheng, JA P. Sekar, B Shaikh, DA Natale, JR Karr Genome biology 21, 1-21, 2020 | 14 | 2020 |
High-risk mucosal human papillomavirus 16 (HPV16) E6 protein and cutaneous HPV5 and HPV8 E6 proteins employ distinct strategies to interfere with interferon regulatory factor 3 … J Poirson, IP Suarez, ML Straub, A Cousido-Siah, P Peixoto, E Hervouet, ... Journal of Virology 96 (10), e01875-21, 2022 | 13 | 2022 |