| Large-scale multi-omic analysis of COVID-19 severity KA Overmyer, E Shishkova, IJ Miller, J Balnis, MN Bernstein, ... Cell systems 12 (1), 23-40. e7, 2021 | 573 | 2021 |
| ChatGPT and large language models in academia: opportunities and challenges JG Meyer, RJ Urbanowicz, PCN Martin, K O’Connor, R Li, PC Peng, ... BioData mining 16 (1), 20, 2023 | 438 | 2023 |
| The mitochondrial acylome emerges: proteomics, regulation by sirtuins, and metabolic and disease implications C Carrico, JG Meyer, W He, BW Gibson, E Verdin Cell metabolism 27 (3), 497-512, 2018 | 305 | 2018 |
| Dietary sugars alter hepatic fatty acid oxidation via transcriptional and post-translational modifications of mitochondrial proteins S Softic, JG Meyer, GX Wang, MK Gupta, TM Batista, HPMM Lauritzen, ... Cell metabolism 30 (4), 735-753. e4, 2019 | 205 | 2019 |
| Regulation of UCP1 and mitochondrial metabolism in brown adipose tissue by reversible succinylation GX Wang, JG Meyer, W Cai, S Softic, ME Li, E Verdin, C Newgard, ... Molecular cell 74 (4), 844-857. e7, 2019 | 170 | 2019 |
| Clinical applications of quantitative proteomics using targeted and untargeted data-independent acquisition techniques JG Meyer, B Schilling Expert review of proteomics 14 (5), 419-429, 2017 | 166 | 2017 |
| Identification of novel protein lysine acetyltransferases in Escherichia coli DG Christensen, JG Meyer, JT Baumgartner, AK D’Souza, WC Nelson, ... MBio 9 (5), 10.1128/mbio. 01905-18, 2018 | 155* | 2018 |
| Site-specific identification and quantitation of endogenous SUMO modifications under native conditions RJ Lumpkin, H Gu, Y Zhu, M Leonard, AS Ahmad, KR Clauser, JG Meyer, ... Nature communications 8 (1), 1171, 2017 | 139 | 2017 |
| Global detection of human variants and isoforms by deep proteome sequencing P Sinitcyn, AL Richards, RJ Weatheritt, DR Brademan, H Marx, ... Nature biotechnology 41 (12), 1776-1786, 2023 | 137 | 2023 |
| Protein turnover in aging and longevity N Basisty, JG Meyer, B Schilling Proteomics 18 (5-6), 1700108, 2018 | 121 | 2018 |
| Learning Drug Functions from Chemical Structures with Convolutional Neural Networks and Random Forests J Meyer, S Liu, I Miller, JJ Coon, A Gitter Journal of Chemical Information and Modeling 59 (10), 4438-4449, 2019 | 106 | 2019 |
| Deep learning neural network tools for proteomics JG Meyer Cell Reports Methods 1 (2), 2021 | 88 | 2021 |
| Quantification of lysine acetylation and succinylation stoichiometry in proteins using mass spectrometric data-independent acquisitions (SWATH) JG Meyer, AK D’Souza, DJ Sorensen, MJ Rardin, AJ Wolfe, BW Gibson, ... Journal of the American Society for Mass Spectrometry 27 (11), 1758-1771, 2016 | 85 | 2016 |
| Quantitative shotgun proteome analysis by direct infusion JG Meyer, NM Niemi, DJ Pagliarini, JJ Coon Nature methods 17 (12), 1222-1228, 2020 | 76 | 2020 |
| Charge state coalescence during electrospray ionization improves peptide identification by tandem mass spectrometry JG Meyer, E A. Komives Journal of the American Society for Mass Spectrometry 23 (8), 1390-1399, 2012 | 76 | 2012 |
| Expanding proteome coverage with orthogonal-specificity α-lytic proteases JG Meyer, S Kim, DA Maltby, M Ghassemian, N Bandeira, EA Komives Molecular & Cellular Proteomics 13 (3), 823-835, 2014 | 73 | 2014 |
| PIQED: automated identification and quantification of protein modifications from DIA-MS data JG Meyer, S Mukkamalla, H Steen, AI Nesvizhskii, BW Gibson, B Schilling Nature Methods 14 (14), 646–647, 2017 | 67 | 2017 |
| Temporal dynamics of liver mitochondrial protein acetylation and succinylation and metabolites due to high fat diet and/or excess glucose or fructose JG Meyer, S Softic, N Basisty, MJ Rardin, E Verdin, BW Gibson, ... PloS one 13 (12), e0208973, 2018 | 52 | 2018 |
| SUCLA2 mutations cause global protein succinylation contributing to the pathomechanism of a hereditary mitochondrial disease P Gut, S Matilainen, JG Meyer, P Pällijeff, J Richard, CJ Carroll, L Euro, ... Nature communications 11 (1), 5927, 2020 | 51 | 2020 |
| Peptide correlation analysis (PeCorA) reveals differential proteoform regulation M Dermit, TM Peters-Clarke, E Shishkova, JG Meyer Journal of proteome research 20 (4), 1972-1980, 2020 | 40 | 2020 |