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José Luis Ruiz (0000-0003-1901-1888)
José Luis Ruiz (0000-0003-1901-1888)
Bioinformatics Unit. IPBLN-CSIC
Verifisert e-postadresse på csic.es - Startside
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Prenatal particulate air pollution and DNA methylation in newborns: an epigenome-wide meta-analysis
O Gruzieva, CJ Xu, P Yousefi, C Relton, SK Merid, CV Breton, L Gao, ...
Environmental health perspectives 127 (5), 057012, 2019
1602019
Characterization of the accessible genome in the human malaria parasite Plasmodium falciparum
JL Ruiz, JJ Tena, C Bancells, A Cortés, JL Gómez-Skarmeta, ...
Nucleic acids research 46 (18), 9414-9431, 2018
682018
Chromatin changes in Anopheles gambiae induced by Plasmodium falciparum infection
JL Ruiz, RS Yerbanga, T Lefèvre, JB Ouedraogo, VG Corces, ...
Epigenetics & Chromatin 12, 1-18, 2019
432019
The regulatory genome of the malaria vector Anopheles gambiae: integrating chromatin accessibility and gene expression
JL Ruiz, LC Ranford-Cartwright, E Gómez-Díaz
NAR genomics and bioinformatics 3 (1), lqaa113, 2021
242021
Chromatin structure and function in mosquitoes
ÓM Lezcano, M Sánchez-Polo, JL Ruiz, E Gómez-Díaz
Frontiers in Genetics 11, 602949, 2020
132020
The second life of Plasmodium in the mosquito host: gene regulation on the move
JL Ruiz, E Gómez-Díaz
Briefings in functional genomics 18 (5), 313-357, 2019
132019
Cortistatin deficiency reveals a dysfunctional brain endothelium with impaired gene pathways, exacerbated immune activation, and disrupted barrier integrity
J Castillo-González, JL Ruiz, I Serrano-Martínez, I Forte-Lago, ...
Journal of Neuroinflammation 20 (1), 226, 2023
122023
From contigs towards chromosomes: automatic improvement of long read assemblies (ILRA)
JL Ruiz, S Reimering, JD Escobar-Prieto, NMB Brancucci, DF Echeverry, ...
Briefings in Bioinformatics 24 (4), bbad248, 2023
92023
Heat stress factors expressed during seed maturation differentially regulate seed longevity and seedling greening
C Almoguera, P Prieto-Dapena, R Carranco, JL Ruiz, J Jordano
Plants 9 (3), 335, 2020
92020
Exploring the microbiome in human reproductive tract: high-throughput methods for the taxonomic characterization of microorganisms
E Salas-Espejo, LC Terrón-Camero, JL Ruiz, NM Molina, E Andrés-León
Seminars in Reproductive Medicine 41 (05), 125-143, 2023
22023
reanalyzerGSE: tackling the everlasting lack of reproducibility and reanalyses in transcriptomics
JL Ruiz, LC Terrón-Camero, J Castillo-González, I Fernández-Rengel, ...
bioRxiv, 2023.07. 12.548663, 2023
22023
From contigs towards chromosomes: automatic improvement of long read assemblies (ILRA)
JL Ruiz, S Reimering, M Sanders, JD Escobar-Prieto, NMB Brancucci, ...
bioRxiv, 2021.07. 30.454413, 2021
12021
Epigenome-Wide Meta-Analysis of DNA Methylation in Children related to Prenatal Particulate Air Pollution Exposure
O Gruzieva, CV Breton, HT den Dekker, A Ghantous, AC Just, M Plusquin, ...
ISEE Conference Abstracts 29 2017 (1), 172, 2017
12017
Genome drafts of Lotmaria passim strains C2 and C3 isolated from honey bees in Spain
JL Ruiz, A Marin, J Carreira de Paula, T Gómez-Moracho, ...
Microbiology Resource Announcements 14 (1), e00642-24, 2025
2025
Protective effect of cortistatin upon thymic regression
M Garcia-Frutos, M Caro, JL Ruiz, N Martin-Morales, F O'Valle, ...
EUROPEAN JOURNAL OF IMMUNOLOGY 54, 1199-1199, 2024
2024
Alternative splicing and its regulation in the malaria vector Anopheles gambiae
B Díaz-Terenti, JL Ruiz, E Gómez-Díaz
Frontiers in Malaria 2, 1347790, 2024
2024
The neuropeptide Cortistatin regulates the programming of brain endothelial cells under physiological and pathological conditions
E Gonzalez-Rey, J Ruiz, I Serrano-Martínez, I Forte-Lago, ...
IBRO Neuroscience Reports 15, S277, 2023
2023
The reanayzerGSE pipeline: tackling the everlasting lack of reproducibility and reanalyses in transcriptomics data.
JL Ruiz, LC Terrón-Camero, J Castillo-González, I Fernandez Rengel, ...
2023
Transcriptional Regulation and Epigenetic Mechanisms Underlying Host-Parasite Interactions in Human Malaria
JLR Rodríguez
Universidad de Sevilla, 2022
2022
The regulatory genome of the malaria vector Anopheles gambiae: integrating chromatin accessibility and gene expression
JL Ruiz, LC Ranford-Cartwright, E Gomez-Diaz
bioRxiv, 2020
2020
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Artikler 1–20