Levi Waldron

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Curtis HuttenhowerDepartment of Biostatistics, Harvard School of Public HealthVerifisert e-postadresse på hsph.harvard.edu
Nicola SegataDepartment CIBIO, University of TrentoVerifisert e-postadresse på unitn.it
Ludwig GeistlingerCenter for Computational Biomedicine, Harvard Medical SchoolVerifisert e-postadresse på hms.harvard.edu
Dirk GeversJanssen Human Microbiome InstituteVerifisert e-postadresse på its.jnj.com
Igor JurisicaVerifisert e-postadresse på ai.utoronto.ca
Wendy Sarah GarrettHarvardVerifisert e-postadresse på hsph.harvard.edu
Giovanni ParmigianiProfessor Department of Data Science, DFCIVerifisert e-postadresse på dfci.harvard.edu
Marcel M. Ramos PérezCUNY Graduate School of Public Health and Health PolicyVerifisert e-postadresse på sph.cuny.edu
Markus RiesterNovartis Institutes for Biomedical ResearchVerifisert e-postadresse på novartis.com
Michael BirrerProfessor Medicine HMSVerifisert e-postadresse på partners.org
Eric Alan FranzosaSenior Research Scientist / Harvard T. H. Chan School of Public HealthVerifisert e-postadresse på hsph.harvard.edu
Benjamin Haibe-KainsScientist (Principal Investigator), Princess Margaret Cancer Centre, University Health NetworkVerifisert e-postadresse på uhnresearch.ca
Sean DavisUniversity of ColoradoVerifisert e-postadresse på cuanschutz.edu
Jennifer Beam DowdProfessor of Demography & Population Health, University of OxfordVerifisert e-postadresse på demography.ox.ac.uk
Fei-Fei LiuUniversity Health NetworkVerifisert e-postadresse på rmp.uhn.ca
Patricia Pintor dos ReisSão Paulo State University (UNESP)Verifisert e-postadresse på unesp.br
Denis NashCUNY Institute for Implementation Science in Population Health, CUNY School of Public Health, CUNYVerifisert e-postadresse på sph.cuny.edu
Lucas SchifferSenior Scientist, Tempus AIVerifisert e-postadresse på bu.edu
Sarah Gorrell KulkarniCUNY ISPHVerifisert e-postadresse på sph.cuny.edu
Melania Pintilieuniversity helath networkVerifisert e-postadresse på uhnresearch.ca

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Levi Waldron

City University of New York Graduate School of Public Health and Health Policy

Verifisert e-postadresse på sph.cuny.edu - Startside

Bioinformatics


Tittel Sorter etter sitater Sorter etter år Sorter etter tittel	Sitert av Sitert av	År
Metagenomic biomarker discovery and explanation N Segata, J Izard, L Waldron, D Gevers, L Miropolsky, WS Garrett, ... Genome biology 12, 1-18, 2011	13740	2011
Orchestrating high-throughput genomic analysis with Bioconductor W Huber, VJ Carey, R Gentleman, S Anders, M Carlson, BS Carvalho, ... Nature methods 12 (2), 115-121, 2015	3707	2015
Metagenomic microbial community profiling using unique clade-specific marker genes N Segata, L Waldron, A Ballarini, V Narasimhan, O Jousson, ... Nature methods 9 (8), 811-814, 2012	1976	2012
Multivariable association discovery in population-scale meta-omics studies H Mallick, A Rahnavard, LJ McIver, S Ma, Y Zhang, LH Nguyen, TL Tickle, ... PLoS computational biology 17 (11), e1009442, 2021	1503	2021
Stem cell gene expression programs influence clinical outcome in human leukemia K Eppert, K Takenaka, ER Lechman, L Waldron, B Nilsson, P Van Galen, ... Nature medicine 17 (9), 1086-1093, 2011	1215	2011
Composition of the adult digestive tract bacterial microbiome based on seven mouth surfaces, tonsils, throat and stool samples N Segata, SK Haake, P Mannon, KP Lemon, L Waldron, D Gevers, ... Genome biology 13, 1-18, 2012	1209	2012
Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer J Wirbel, PT Pyl, E Kartal, K Zych, A Kashani, A Milanese, JS Fleck, ... Nature medicine 25 (4), 679-689, 2019	1066	2019
Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation AM Thomas, P Manghi, F Asnicar, E Pasolli, F Armanini, M Zolfo, ... Nature medicine 25 (4), 667-678, 2019	826	2019
Orchestrating single-cell analysis with Bioconductor RA Amezquita, ATL Lun, E Becht, VJ Carey, LN Carpp, L Geistlinger, ... Nature methods 17 (2), 137-145, 2020	810	2020
Microbiome connections with host metabolism and habitual diet from 1,098 deeply phenotyped individuals F Asnicar, SE Berry, AM Valdes, LH Nguyen, G Piccinno, DA Drew, ... Nature medicine 27 (2), 321-332, 2021	774	2021
Relating the metatranscriptome and metagenome of the human gut EA Franzosa, XC Morgan, N Segata, L Waldron, J Reyes, AM Earl, ... Proceedings of the National Academy of Sciences 111 (22), E2329-E2338, 2014	713	2014
Assessment of colorectal cancer molecular features along bowel subsites challenges the conception of distinct dichotomy of proximal versus distal colorectum M Yamauchi, T Morikawa, A Kuchiba, Y Imamura, ZR Qian, R Nishihara, ... Gut 61 (6), 847-854, 2012	670	2012
A guide to enterotypes across the human body: meta-analysis of microbial community structures in human microbiome datasets O Koren, D Knights, A Gonzalez, L Waldron, N Segata, R Knight, ... PLoS computational biology 9 (1), e1002863, 2013	612	2013
Machine learning meta-analysis of large metagenomic datasets: tools and biological insights E Pasolli, DT Truong, F Malik, L Waldron, N Segata PLoS computational biology 12 (7), e1004977, 2016	593	2016
Comprehensive MicroRNA profiling for head and neck squamous cell carcinomas ABY Hui, M Lenarduzzi, T Krushel, L Waldron, M Pintilie, W Shi, ... Clinical cancer research 16 (4), 1129-1139, 2010	496	2010
Accessible, curated metagenomic data through ExperimentHub E Pasolli, L Schiffer, P Manghi, A Renson, V Obenchain, DT Truong, ... Nature methods 14 (11), 1023-1024, 2017	441	2017
Transparency and reproducibility in artificial intelligence B Haibe-Kains, GA Adam, A Hosny, F Khodakarami, ... Nature 586 (7829), E14-E16, 2020	423	2020
Racial/ethnic disparities in genomic sequencing DE Spratt, T Chan, L Waldron, C Speers, FY Feng, OO Ogunwobi, ... JAMA oncology 2 (8), 1070-1074, 2016	338	2016
bioBakery: a meta’omic analysis environment LJ McIver, G Abu-Ali, EA Franzosa, R Schwager, XC Morgan, L Waldron, ... Bioinformatics 34 (7), 1235-1237, 2018	317	2018
mRNA transcript quantification in archival samples using multiplexed, color-coded probes PP Reis, L Waldron, RS Goswami, W Xu, Y Xuan, B Perez-Ordonez, ... BMC biotechnology 11, 1-10, 2011	317	2011

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