Georgios A. Pavlopoulos

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Reinhard SchneiderProf. Bioinformatics, University of Luxembourg, Head of Bioinformatics Core Facility, LuxembourgVerifisert e-postadresse på uni.lu
Nikos C KyrpidesJoint Genome Institute, Lawrence Berkeley National LaboratoryVerifisert e-postadresse på lbl.gov
Ioannis IliopoulosProfessor Medical School University of CreteVerifisert e-postadresse på med.uoc.gr
David Páez-EspinoAncilia Biosciences / Former: Mammoth Bio, JGI, UCB, CNB-CSICVerifisert e-postadresse på anciliabio.com
Pantelis BagosProfessor, University of ThessalyVerifisert e-postadresse på dib.uth.gr
Evangelos KaratzasEMBL-EBI, Research FellowVerifisert e-postadresse på ebi.ac.uk
Fotis BaltoumasPost-doctoral Researcher, BSRC "Alexander Fleming"Verifisert e-postadresse på fleming.gr
Nikolas PapanikolaouUniversity of CreteVerifisert e-postadresse på uoc.gr
Emiley Eloe-FadroshMetagenome Program Head, Joint Genome InstituteVerifisert e-postadresse på lbl.gov
THEODOSIOS THEODOSIOUCo-founder ABCureD P.C., Founder TETRAKTYS IntelligenceVerifisert e-postadresse på tetraktysintel.com
Natalia IvanovaDOE Joint Genome InstituteVerifisert e-postadresse på lbl.gov
S KossidaProfessor of BioinformaticsVerifisert e-postadresse på igh.cnrs.fr
Theodoros SoldatosVerifisert e-postadresse på molecularhealth.com
Neha J VargheseDOE Joint Genome InstituteVerifisert e-postadresse på lbl.gov
Charalampos MoschopoulosESAT/SISTA KU LeuvenVerifisert e-postadresse på esat.kuleuven.be
Evangelos PafilisResearcher B, Hellenic Center Marine Research (HCMR)Verifisert e-postadresse på hcmr.gr
Sergey OvchinnikovMITVerifisert e-postadresse på mit.edu
Panagiota KontouAssistant Professor, Department of Mathematics, University of ThessalyVerifisert e-postadresse på uth.gr
Rekha SeshadriU.S. Department of Energy JGIVerifisert e-postadresse på lbl.gov
Michalis HadjithomasLifeMine Therapeutics, Inc.Verifisert e-postadresse på lifeminetx.com

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Georgios A. Pavlopoulos

Director & Bioinformatics Research Professor @ BSRC Alexander Fleming // CEO BioInnovation Greece

Verifisert e-postadresse på fleming.gr - Startside

Bioinformatics Genomics Biological Networks Biodiversity Data Integration


Tittel Sorter etter sitater Sorter etter år Sorter etter tittel	Sitert av Sitert av	År
Uncovering Earth's Virome D Paez-Espino, EA Eloe-Fadrosh, GA Pavlopoulos, AD Thomas, ... Nature, 2016	1092	2016
Using graph theory to analyze biological networks GA Pavlopoulos, M Secrier, CN Moschopoulos, TG Soldatos, S Kossida, ... BioData mining 4, 1-27, 2011	979	2011
Protein structure determination using metagenome sequence data DB Sergey Ovchinnikov, Hahnbeom Park, Neha Varghese, Po-Ssu Huang, Georgios ... Science 355 (6322), 294-298, 2017	553	2017
Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection R Seshadri, SC Leahy, GT Attwood, KH Teh, SC Lambie, AL Cookson, ... Nature biotechnology 36 (4), 359-367, 2018	537	2018
Metagenomics: tools and insights for analyzing next-generation sequencing data derived from biodiversity studies A Oulas, C Pavloudi, P Polymenakou, GA Pavlopoulos, N Papanikolaou, ... Bioinformatics and biology insights 9, BBI. S12462, 2015	506	2015
A guide to conquer the biological network era using graph theory M Koutrouli, E Karatzas, D Paez-Espino, GA Pavlopoulos Frontiers in bioengineering and biotechnology 8, 34, 2020	285	2020
1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life S Mukherjee, R Seshadri, NJ Varghese, EA Eloe-Fadrosh, ... Nature biotechnology 35 (7), 676, 2017	268	2017
A survey of visualization tools for biological network analysis GA Pavlopoulos, AL Wegener, R Schneider Biodata mining 1, 12, 2008	266	2008
Large-scale analyses of human microbiomes reveal thousands of small, novel genes H Sberro, BJ Fremin, S Zlitni, F Edfors, N Greenfield, MP Snyder, ... Cell 178 (5), 1245-1259. e14, 2019	231	2019
IMG/VR: A database of cultured and uncultured DNA Viruses and Retroviruses D Paez-Espino, IMA Chen A, K Palaniappan, A Ratner, K Chu, E Szeto, ... Nucleic Acids Research, 2016	223	2016
Bipartite graphs in systems biology and medicine: a survey of methods and applications GA Pavlopoulos, PI Kontou, A Pavlopoulou, C Bouyioukos, E Markou, ... GigaScience 7 (4), giy014, 2018	218	2018
HipMCL: a high-performance parallel implementation of the Markov clustering algorithm for large-scale networks A Azad, GA Pavlopoulos, CA Ouzounis, NC Kyrpides, A Buluç Nucleic acids research 46 (6), e33-e33, 2018	180	2018
Arena3D: visualization of biological networks in 3D GA Pavlopoulos, S O'Donoghue, V Satagopam, T Soldatos, E Pafilis, ... BMC systems biology 2 (1), 104, 2008	141	2008
Non-targeted virus sequence discovery pipeline and virus clustering for metagenomic data D Paez-Espino, GA Pavlopoulos, NN Ivanova, K NC Nature Protocols, 1673–1682, 2017	130	2017
Visualizing genome and systems biology: technologies, tools, implementation techniques and trends, past, present and future GA Pavlopoulos, D Malliarakis, N Papanikolaou, T Theodosiou, A Enright, ... GigaScience 4 (38), 2015	129	2015
A reference guide for tree analysis and visualization GA Pavlopoulos, TG Soldatos, A Barbosa-Silva, R Schneider BioData mining 3, 1-24, 2010	128	2010
Protein–protein interaction predictions using text mining methods N Papanikolaou, GA Pavlopoulos, T Theodosiou, I Iliopoulos Methods 74, 47-53, 2015	113	2015
Unraveling genomic variation from next generation sequencing data GA Pavlopoulos, A Oulas, E Iacucci, A Sifrim, Y Moreau, R Schneider, ... BioData Mining 6 (13), 2013	93	2013
Unraveling the functional dark matter through global metagenomics GA Pavlopoulos, FA Baltoumas, S Liu, O Selvitopi, AP Camargo, ... Nature 622 (7983), 594-602, 2023	91	2023
Global BioID-based SARS-CoV-2 proteins proximal interactome unveils novel ties between viral polypeptides and host factors involved in multiple COVID19-associated mechanisms EMN Laurent, Y Sofianatos, A Komarova, JP Gimeno, PS Tehrani, DK Kim, ... BioRxiv, 2020.08. 28.272955, 2020	75	2020

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