nnU-Net: a self-configuring method for deep learning-based biomedical image segmentation F Isensee*, PF Jaeger*, SAA Kohl, J Petersen, ... Nature methods 18 (2), 203-211, 2021 | 5145 | 2021 |
Deep learning techniques for automatic MRI cardiac multi-structures segmentation and diagnosis: is the problem solved? O Bernard, A Lalande, C Zotti, F Cervenansky, X Yang, PA Heng, I Cetin, ... IEEE transactions on medical imaging 37 (11), 2514-2525, 2018 | 1975 | 2018 |
The liver tumor segmentation benchmark (lits) P Bilic, P Christ, HB Li, E Vorontsov, A Ben-Cohen, G Kaissis, A Szeskin, ... Medical image analysis 84, 102680, 2023 | 1389 | 2023 |
nnu-net: Self-adapting framework for u-net-based medical image segmentation F Isensee, J Petersen, A Klein, D Zimmerer, PF Jaeger, S Kohl, ... MICCAI 2018, Medical Segmentation Decathlon Challenge Entry, 2018 | 1095 | 2018 |
Monai: An open-source framework for deep learning in healthcare MJ Cardoso, W Li, R Brown, N Ma, E Kerfoot, Y Wang, B Murrey, ... arXiv preprint arXiv:2211.02701, 2022 | 636 | 2022 |
nnU-Net for brain tumor segmentation F Isensee, PF Jäger, PM Full, P Vollmuth, KH Maier-Hein Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries …, 2021 | 421 | 2021 |
Automatic cardiac disease assessment on cine-MRI via time-series segmentation and domain specific features F Isensee*, PF Jaeger*, PM Full, I Wolf, S Engelhardt, ... International workshop on statistical atlases and computational models of …, 2017 | 376 | 2017 |
Automated design of deep learning methods for biomedical image segmentation F Isensee, PF Jäger, SAA Kohl, J Petersen, KH Maier-Hein arXiv preprint arXiv:1904.08128, 2019 | 346 | 2019 |
Retina U-Net: Embarrassingly simple exploitation of segmentation supervision for medical object detection PF Jaeger, SAA Kohl, S Bickelhaupt, F Isensee, TA Kuder, HP Schlemmer, ... ML4H Workshop, Neurips, 171-183, 2020 | 272 | 2020 |
Common limitations of image processing metrics: A picture story A Reinke, MD Tizabi, CH Sudre, M Eisenmann, T Rädsch, M Baumgartner, ... arXiv preprint arXiv:2104.05642, 2021 | 233 | 2021 |
nnu-net: Breaking the spell on successful medical image segmentation F Isensee, J Petersen, SAA Kohl, PF Jäger, KH Maier-Hein arXiv preprint arXiv:1904.08128 1 (1-8), 2, 2019 | 228 | 2019 |
Metrics reloaded: recommendations for image analysis validation L Maier-Hein, A Reinke, P Godau, MD Tizabi, F Buettner, E Christodoulou, ... Nature methods 21 (2), 195-212, 2024 | 198 | 2024 |
Mednext: transformer-driven scaling of convnets for medical image segmentation S Roy, G Koehler, C Ulrich, M Baumgartner, J Petersen, F Isensee, ... International Conference on Medical Image Computing and Computer-Assisted …, 2023 | 181 | 2023 |
Metrics reloaded: Pitfalls and recommendations for image analysis validation L Maier-Hein, B Menze arXiv. org, 2022 | 130 | 2022 |
The cell tracking challenge: 10 years of objective benchmarking M Maška, V Ulman, P Delgado-Rodriguez, E Gómez-de-Mariscal, ... Nature Methods 20 (7), 1010-1020, 2023 | 116 | 2023 |
Radiomics based on adapted diffusion kurtosis imaging helps to clarify most mammographic findings suspicious for cancer S Bickelhaupt*, PF Jaeger*, FB Laun, W Lederer, H Daniel, TA Kuder, ... Radiology 287 (3), 761-770, 2018 | 107 | 2018 |
Understanding metric-related pitfalls in image analysis validation A Reinke, MD Tizabi, M Baumgartner, M Eisenmann, D Heckmann-Nötzel, ... Nature methods 21 (2), 182-194, 2024 | 96 | 2024 |
nndetection: A self-configuring method for medical object detection M Baumgartner*, PF Jäger*, F Isensee, ... International Conference on Medical Image Computing and Computer-Assisted …, 2021 | 96 | 2021 |
nnu-net revisited: A call for rigorous validation in 3d medical image segmentation F Isensee, T Wald, C Ulrich, M Baumgartner, S Roy, K Maier-Hein, ... International Conference on Medical Image Computing and Computer-Assisted …, 2024 | 92 | 2024 |
Comparing methods of detecting and segmenting unruptured intracranial aneurysms on TOF-MRAS: The ADAM challenge KM Timmins, IC van der Schaaf, E Bennink, YM Ruigrok, X An, ... Neuroimage 238, 118216, 2021 | 71 | 2021 |