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Richard LessellsSenior Infectious Diseases Specialist, University of KwaZulu-NatalVerifisert e-postadresse på ukzn.ac.za
Deenan PillayVerifisert e-postadresse på africacentre.ac.za
Salim S. Abdool KarimDirector: CAPRISAVerifisert e-postadresse på ukzn.ac.za
Frank TanserSchool for Data Science, Stellenbosch University & Senior Faculty, AHRI, South AfricaVerifisert e-postadresse på sun.ac.za
Susan EngelbrechtStellenbosch University and NHLSVerifisert e-postadresse på sun.ac.za
Theresa RossouwDepartment of Immunology, University of PretoriaVerifisert e-postadresse på up.ac.za
Darren MartinUniversity of Cape TownVerifisert e-postadresse på uct.ac.za
Christopher SeebregtsJembi Health SystemsVerifisert e-postadresse på jembi.org
Lynn MorrisNational Institute for Communicable DiseasesVerifisert e-postadresse på nicd.ac.za
Oliver PybusUniversity of Oxford / Royal Veterinary CollegeVerifisert e-postadresse på zoo.ox.ac.uk
Till Winfried BärnighausenHeidelberg Institute of Global Health, Faculty of Medicine and University Hospital, HeidelbergVerifisert e-postadresse på uni-heidelberg.de
Nuno R. FariaProfessor, Imperial College London / University of São PauloVerifisert e-postadresse på ic.ac.uk
Robert ShaferProfessor of Medicine, Stanford UniversityVerifisert e-postadresse på stanford.edu
Justen ManasaAssociate Professor, University of Zimbabwe, Harare, ZimbabweVerifisert e-postadresse på uz.edu.zw
Marco SalemiHolloway Chair and Professor of Experimental PathologyVerifisert e-postadresse på pathology.ufl.edu
Andrew RambautProfessor of Molecular Evolution, University of EdinburghVerifisert e-postadresse på ed.ac.uk
Wolfgang PreiserProfessor and Head: Division of Medical Virology, Stellenbosch University / NHLS TygerbergVerifisert e-postadresse på sun.ac.za
Collins IwujiDepartment of Global Health & Infection, Brighton & Sussex Medical School, UKVerifisert e-postadresse på bsms.ac.uk
Gert van ZylDivision of Medical Virology, Stellenbosch University and NHLS TygerbergVerifisert e-postadresse på sun.ac.za
Ana AbecasisGlobal Health and Tropical Medicine, Instituto de Higiene e Medicina Tropical, NOVA Univ LisboaVerifisert e-postadresse på ihmt.unl.pt

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Tulio de Oliveira

Stellenbosch University

Verifisert e-postadresse på sun.ac.za - Startside

Bioinformatics Genomics Phylogenetics Viruses


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Detection of a SARS-CoV-2 variant of concern in South Africa H Tegally, E Wilkinson, M Giovanetti, A Iranzadeh, V Fonseca, ... Nature 592 (7854), 438-443, 2021	1650	2021
Rapid epidemic expansion of the SARS-CoV-2 Omicron variant in southern Africa R Viana, S Moyo, DG Amoako, H Tegally, C Scheepers, CL Althaus, ... Nature 603 (7902), 679-686, 2022	1646	2022
Efficacy of the ChAdOx1 nCoV-19 Covid-19 vaccine against the B. 1.351 variant SA Madhi, V Baillie, CL Cutland, M Voysey, AL Koen, L Fairlie, ... New England Journal of Medicine 384 (20), 1885-1898, 2021	1421	2021
SARS-CoV-2 501Y. V2 escapes neutralization by South African COVID-19 donor plasma CK Wibmer, F Ayres, T Hermanus, M Madzivhandila, P Kgagudi, ... Nature medicine 27 (4), 622-625, 2021	1327	2021
Emergence and rapid spread of a new severe acute respiratory syndrome-related coronavirus 2 (SARS-CoV-2) lineage with multiple spike mutations in South Africa H Tegally, E Wilkinson, M Giovanetti, A Iranzadeh, V Fonseca, ... medrxiv, 2020.12. 21.20248640, 2020	1240	2020
Omicron extensively but incompletely escapes Pfizer BNT162b2 neutralization S Cele, L Jackson, DS Khoury, K Khan, T Moyo-Gwete, H Tegally, JE San, ... Nature 602 (7898), 654-656, 2022	1127	2022
The biological and clinical significance of emerging SARS-CoV-2 variants K Tao, PL Tzou, J Nouhin, RK Gupta, T de Oliveira, SL Kosakovsky Pond, ... Nature Reviews Genetics 22 (12), 757-773, 2021	1119	2021
New SARS-CoV-2 variants—clinical, public health, and vaccine implications SS Abdool Karim, T de Oliveira New England Journal of Medicine 384 (19), 1866-1868, 2021	809	2021
Efficacy of NVX-CoV2373 Covid-19 vaccine against the B. 1.351 variant V Shinde, S Bhikha, Z Hoosain, M Archary, Q Bhorat, L Fairlie, U Lalloo, ... New England Journal of Medicine 384 (20), 1899-1909, 2021	722	2021
Escape of SARS-CoV-2 501Y. V2 from neutralization by convalescent plasma S Cele, I Gazy, L Jackson, SH Hwa, H Tegally, G Lustig, J Giandhari, ... Nature 593 (7857), 142-146, 2021	701	2021
Renewing Felsenstein’s phylogenetic bootstrap in the era of big data F Lemoine, JB Domelevo Entfellner, E Wilkinson, D Correia, ... Nature 556 (7702), 452-456, 2018	640	2018
Emergence of SARS-CoV-2 omicron lineages BA. 4 and BA. 5 in South Africa H Tegally, M Moir, J Everatt, M Giovanetti, C Scheepers, E Wilkinson, ... Nature medicine 28 (9), 1785-1790, 2022	632	2022
An automated genotyping system for analysis of HIV-1 and other microbial sequences T De Oliveira, K Deforche, S Cassol, M Salminen, D Paraskevis, ... Bioinformatics 21 (19), 3797-3800, 2005	601	2005
T cell responses to SARS-CoV-2 spike cross-recognize Omicron R Keeton, MB Tincho, A Ngomti, R Baguma, N Benede, A Suzuki, K Khan, ... Nature 603 (7901), 488-492, 2022	577	2022
HIV-1 drug resistance before initiation or re-initiation of first-line antiretroviral therapy in low-income and middle-income countries: a systematic review and meta-regression … RK Gupta, J Gregson, N Parkin, H Haile-Selassie, A Tanuri, LA Forero, ... The Lancet infectious diseases 18 (3), 346-355, 2018	450	2018
Automated subtyping of HIV-1 genetic sequences for clinical and surveillance purposes: performance evaluation of the new REGA version 3 and seven other tools AC Pineda-Peña, NR Faria, S Imbrechts, P Libin, AB Abecasis, ... Infection, genetics and evolution 19, 337-348, 2013	421	2013
Sixteen novel lineages of SARS-CoV-2 in South Africa H Tegally, E Wilkinson, RJ Lessells, J Giandhari, S Pillay, N Msomi, ... Nature medicine 27 (3), 440-446, 2021	380	2021
SARS-CoV-2 Omicron has extensive but incomplete escape of Pfizer BNT162b2 elicited neutralization and requires ACE2 for infection S Cele, L Jackson, DS Khoury, K Khan, T Moyo-Gwete, H Tegally, JE San, ... MedRxiv, 2021	371	2021
Genome Detective: an automated system for virus identification from high-throughput sequencing data M Vilsker, Y Moosa, S Nooij, V Fonseca, Y Ghysens, K Dumon, ... Bioinformatics 35 (5), 871-873, 2019	370	2019
Genomic and epidemiological monitoring of yellow fever virus transmission potential NR Faria, MUG Kraemer, SC Hill, J Góes de Jesus, RS Aguiar, FCM Iani, ... Science 361 (6405), 894-899, 2018	349	2018

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