| OGEE v3: Online GEne Essentiality database with increased coverage of organisms and human cell lines S Gurumayum, P Jiang, X Hao, TL Campos, ND Young, PK Korhonen, ... Nucleic acids research 49 (D1), D998-D1003, 2021 | 67 | 2021 |
| ViralFlow: a versatile automated workflow for SARS-CoV-2 genome assembly, lineage assignment, mutations and intrahost variant detection FZ Dezordi, AMS Neto, TL Campos, PMC Jeronimo, CF Aksenen, ... Viruses 14 (2), 217, 2022 | 64* | 2022 |
| Revisiting Key Entry Routes of Human Epidemic Arboviruses into the Mainland Americas through Large‐Scale Phylogenomics TDL Campos, R Durães-Carvalho, AM Rezende, OV de Carvalho, A Kohl, ... International journal of genomics 2018 (1), 6941735, 2018 | 48 | 2018 |
| Reemergence of dengue virus serotype 3, Brazil, 2023 FG Naveca, GA Santiago, RM Maito, CAR Meneses, VA do Nascimento, ... Emerging infectious diseases 29 (7), 1482, 2023 | 47 | 2023 |
| Identification of G protein-coupled receptors in Schistosoma haematobium and S. mansoni by comparative genomics TDL Campos, ND Young, PK Korhonen, RS Hall, S Mangiola, A Lonie, ... Parasites & vectors 7, 1-11, 2014 | 46 | 2014 |
| Human outbreaks of a novel reassortant Oropouche virus in the Brazilian Amazon region FG Naveca, TAP Almeida, V Souza, V Nascimento, D Silva, F Nascimento, ... Nature Medicine 30 (12), 3509-3521, 2024 | 44* | 2024 |
| Extracellular vesicles produced by the protozoan parasite Trichomonas vaginalis contain a preferential cargo of tRNA-derived small RNAs A Artuyants, TL Campos, AK Rai, PJ Johnson, P Dauros-Singorenko, ... International journal for parasitology 50 (14), 1145-1155, 2020 | 43 | 2020 |
| An evaluation of machine learning approaches for the prediction of essential genes in eukaryotes using protein sequence-derived features TL Campos, PK Korhonen, RB Gasser, ND Young Computational and structural biotechnology journal 17, 785-796, 2019 | 39 | 2019 |
| Comparative Genomics of Acinetobacter baumannii Clinical Strains From Brazil Reveals Polyclonal Dissemination and Selective Exchange of Mobile Genetic … NC Leal, TL Campos, AM Rezende, C Docena, CL Mendes-Marques, ... Frontiers in Microbiology 11, 1176, 2020 | 37 | 2020 |
| Genome sequencing reveals coinfection by multiple chikungunya virus genotypes in a recent outbreak in Brazil LC Machado, MC de Morais-Sobral, TL Campos, MR Pereira, ... PLoS Neglected Tropical Diseases 13 (5), e0007332, 2019 | 36 | 2019 |
| HTT-DB: new features and updates BR Dotto, EL Carvalho, AF da Silva, FZ Dezordi, PM Pinto, TL Campos, ... Database 2018, bax102, 2018 | 27 | 2018 |
| Ciprofloxacin-resistant and extended-spectrum β-lactamase-producing Escherichia coli ST410 strain carrying the mcr-1 gene associated with bloodstream infection IV Rocha, CA das Neves Andrade, T de Lima Campos, AM Rezende, ... International journal of antimicrobial agents 49 (5), 655-656, 2017 | 27 | 2017 |
| Building protein-protein interaction networks for Leishmania species through protein structural information CR dos Santos Vasconcelos, T de Lima Campos, AM Rezende BMC bioinformatics 19, 1-13, 2018 | 19 | 2018 |
| Combined use of feature engineering and machine-learning to predict essential genes in Drosophila melanogaster TL Campos, PK Korhonen, A Hofmann, RB Gasser, ND Young NAR Genomics and Bioinformatics 2 (3), lqaa051, 2020 | 18 | 2020 |
| Predicting gene essentiality in Caenorhabditis elegans by feature engineering and machine-learning TL Campos, PK Korhonen, PW Sternberg, RB Gasser, ND Young Computational and Structural Biotechnology Journal 18, 1093-1102, 2020 | 17 | 2020 |
| ViralFlow v1. 0—a computational workflow for streamlining viral genomic surveillance AF da Silva, AM da Silva Neto, CF Aksenen, PMC Jeronimo, FZ Dezordi, ... NAR genomics and bioinformatics 6 (2), lqae056, 2024 | 14 | 2024 |
| High frequency of OXA-253-producing Acinetobacter baumannii in different hospitals in Recife, Brazil FL de Sá Cavalcanti, CL Mendes-Marques, CRS Vasconcelos, ... Antimicrobial agents and chemotherapy 61 (1), 10.1128/aac. 01309-16, 2017 | 14 | 2017 |
| Harnessing model organism genomics to underpin the machine learning-based prediction of essential genes in eukaryotes–Biotechnological implications TL Campos, PK Korhonen, A Hofmann, RB Gasser, ND Young Biotechnology Advances 54, 107822, 2022 | 13 | 2022 |
| Expansion of Oropouche virus in non-endemic Brazilian regions: analysis of genomic characterisation and ecological drivers T Gräf, E Delatorre, C do Nascimento Ferreira, A Rossi, HGG Santos, ... The Lancet Infectious Diseases, 2024 | 12 | 2024 |
| Multiple introductions and country-wide spread of DENV-2 genotype II (Cosmopolitan) in Brazil T Gräf, CDN Ferreira, GB De Lima, RE De Lima, LC Machado, ... Virus Evolution 9 (2), vead059, 2023 | 11 | 2023 |
Gabriel da Luz WallauFIOCRUZ - Aggeu Magalhães Institute (IAM), Universidade Federal de Santa Maria (UFSM)Verifisert e-postadresse på cpqam.fiocruz.br