Aaron Darling

Sitert av

	Alle	Siden 2020
Sitater	53544	27252
h-indeks	54	46
i10-indeks	102	83

6000

3000

1500

4500

20062007200820092010201120122013201420152016201720182019202020212022202320242025174 153 190 270 352 517 835 1483 2392 3016 3558 3943 4223 4642 5097 5559 5624 5046 5164 754

Offentlig tilgang

Vis alle

67 artikler

0 artikler

tilgjengelige

ikke tilgjengelige

Basert på finansieringsmandater

Medforfattere

Daniel L. AyresUniversity of MarylandVerifisert e-postadresse på umd.edu
Jonathan A. EisenProfessor, University of California, Davis (UC Davis), Department of Evolution and EcologyVerifisert e-postadresse på ucdavis.edu
Marc A. SuchardProfessor, University of California, Los AngelesVerifisert e-postadresse på ucla.edu
Nicole T. PernaProfessor of GeneticsVerifisert e-postadresse på wisc.edu
Fredrik RonquistProfessor, Swedish Museum of Natural History, Dept. Bioinformatics and GeneticsVerifisert e-postadresse på nrm.se
John P. HuelsenbeckUniversity of California, BerkeleyVerifisert e-postadresse på berkeley.edu
Bret LargetProfessor of Statistics and of Botany, University of WisconsinVerifisert e-postadresse på wisc.edu
Sebastian HöhnaLudwig-Maximilians-Universität, MünchenVerifisert e-postadresse på lmu.de
Steven P. DjordjevicProfessorVerifisert e-postadresse på uts.edu.au
Guillaume Jospinbioinformatician at AnimalBiomeVerifisert e-postadresse på animalbiome.com
Matthew Z DeMaereAIMI Pathway fellow, University of Technology SydneyVerifisert e-postadresse på uts.edu.au
David CoilUC DavisVerifisert e-postadresse på ucdavis.edu
Catherine M BurkeUniversity of Technology SydneyVerifisert e-postadresse på uts.edu.au
Liang LiuProfessor of Statistics, UGAVerifisert e-postadresse på uga.edu
Jenna Morgan LangPostdoc in the lab of Jonathan Eisen at UC DavisVerifisert e-postadresse på lbl.gov
Alexander SczyrbaForschungszentrum Jülich (IBG-5), Bielefeld University, Centrum for Biotechnology (CeBiTec)Verifisert e-postadresse på fz-juelich.de
Toni ChapmanNSW Department of Primary IndustriesVerifisert e-postadresse på dpi.nsw.gov.au
Xavier DidelotUniversity of WarwickVerifisert e-postadresse på warwick.ac.uk
Mark A. RaganInstitute for Molecular Bioscience, The University of QueenslandVerifisert e-postadresse på uq.edu.au
Piklu Roy ChowdhurySenior Research Associate at the Australian Institute for Microbiology and Infection UTS, AustraliaVerifisert e-postadresse på uts.edu.au

Følg

Aaron Darling

Independent

Verifisert e-postadresse på illumina.com - Startside

algorithms for sequence analysis genome evolution high throughput sequencing


Tittel Sorter etter sitater Sorter etter år Sorter etter tittel	Sitert av Sitert av	År
MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space F Ronquist, M Teslenko, P Van Der Mark, DL Ayres, A Darling, S Höhna, ... Systematic biology 61 (3), 539-542, 2012	27107	2012
Mauve: multiple alignment of conserved genomic sequence with rearrangements ACE Darling, B Mau, FR Blattner, NT Perna Genome research 14 (7), 1394-1403, 2004	5074	2004
progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement AE Darling, B Mau, NT Perna PloS one 5 (6), e11147, 2010	4144	2010
Insights into the phylogeny and coding potential of microbial dark matter C Rinke, P Schwientek, A Sczyrba, NN Ivanova, IJ Anderson, JF Cheng, ... Nature 499 (7459), 431-437, 2013	2497	2013
The Amphimedon queenslandica genome and the evolution of animal complexity M Srivastava, O Simakov, J Chapman, B Fahey, MEA Gauthier, T Mitros, ... Nature 466 (7307), 720-726, 2010	1182	2010
A5-miseq: an updated pipeline to assemble microbial genomes from Illumina MiSeq data D Coil, G Jospin, AE Darling Bioinformatics 31 (4), 587-589, 2014	1141	2014
Critical assessment of metagenome interpretation—a benchmark of metagenomics software A Sczyrba, P Hofmann, P Belmann, D Koslicki, S Janssen, J Dröge, ... Nature methods 14 (11), 1063-1071, 2017	820	2017
BEAGLE: an application programming interface and high-performance computing library for statistical phylogenetics DL Ayres, A Darling, DJ Zwickl, P Beerli, MT Holder, PO Lewis, ... Systematic biology 61 (1), 170-173, 2012	712	2012
PhyloSift: phylogenetic analysis of genomes and metagenomes AE Darling, G Jospin, E Lowe, FA Matsen IV, HM Bik, JA Eisen PeerJ 2, e243, 2014	674*	2014
Assemblathon 1: a competitive assessment of de novo short read assembly methods D Earl, K Bradnam, JS John, A Darling, D Lin, J Fass, HOK Yu, V Buffalo, ... Genome research 21 (12), 2224-2241, 2011	633	2011
Reordering contigs of draft genomes using the Mauve aligner AI Rissman, B Mau, BS Biehl, AE Darling, JD Glasner, NT Perna Bioinformatics 25 (16), 2071-2073, 2009	615	2009
The design, implementation, and evaluation of mpiBLAST AE Darling, L Carey, WC Feng Los Alamos National Laboratory (LANL), Los Alamos, NM (United States), 2003	579	2003
Complete Genome Sequence and Comparative Genomics of Shigella flexneri Serotype 2a Strain 2457T J Wei, MB Goldberg, V Burland, MM Venkatesan, W Deng, G Fournier, ... Infection and immunity 71 (5), 2775-2786, 2003	512	2003
An integrated pipeline for de novo assembly of microbial genomes A Tritt, JA Eisen, MT Facciotti, AE Darling Public Library of Science 7 (9), e42304, 2012	499	2012
Nitrogen fixation in a landrace of maize is supported by a mucilage-associated diazotrophic microbiota A Van Deynze, P Zamora, PM Delaux, C Heitmann, D Jayaraman, ... PLoS biology 16 (8), e2006352, 2018	372	2018
Metagenomic sequencing of an in vitro-simulated microbial community JL Morgan, AE Darling, JA Eisen PloS one 5 (4), e10209, 2010	290	2010
Dynamics of genome rearrangement in bacterial populations AE Darling, I Miklós, MA Ragan PLoS genetics 4 (7), e1000128, 2008	283	2008
A global metagenomic map of urban microbiomes and antimicrobial resistance D Danko, D Bezdan, EE Afshin, S Ahsanuddin, C Bhattacharya, DJ Butler, ... Cell 184 (13), 3376-3393. e17, 2021	276	2021
Critical assessment of metagenome interpretation: the second round of challenges F Meyer, A Fritz, ZL Deng, D Koslicki, TR Lesker, A Gurevich, G Robertson, ... Nature methods 19 (4), 429-440, 2022	274	2022
Patterns of gene flow define species of thermophilic Archaea H Cadillo-Quiroz, X Didelot, NL Held, A Herrera, A Darling, ML Reno, ... PLoS biology 10 (2), e1001265, 2012	239	2012

Systemet kan ikke utføre handlingen. Prøv på nytt senere.

Artikler 1–20

Sitater per år

Duplikatsitater

Sammenslåtte sitater

Legg til medforfattereMedforfattere

Følg

Sitert av

Medforfattere