Olga T. Schubert

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Aebersold RETH ZurichVerifisert e-postadresse på imsb.biol.ethz.ch
Ben CollinsProfessor of Proteomics and Chemical Biology, Queen's University BelfastVerifisert e-postadresse på qub.ac.uk
Hannes RöstAssistant Professor, University of TorontoVerifisert e-postadresse på utoronto.ca
George RosenbergerColumbia UniversityVerifisert e-postadresse på cumc.columbia.edu
Ludovic GilletETH ZürichVerifisert e-postadresse på imsb.biol.ethz.ch
Christina LudwigBavarian Center for Biomolecular Mass Spectrometry (BayBioMS), Technical University MunichVerifisert e-postadresse på tum.de
Martin GengenbacherCenter for Discovery and InnovationVerifisert e-postadresse på hmh-cdi.org
Stefan H.E. KaufmannDept. Immunology, Max Planck Institute for Infection BiologyVerifisert e-postadresse på mpiib-berlin.mpg.de
Witold Eryk WolskiFunctional Genomics Center ZurichVerifisert e-postadresse på fgcz.ethz.ch
Pedro NavarroThermo Fisher Scientific (Bremen) GmbHVerifisert e-postadresse på thermofisher.com
Henry LamHong Kong University of Science and Technology OR Massachusetts Institute of Technology OR InstituteVerifisert e-postadresse på ust.hk
Teresa CortesInstitute of Biomedicine of Valencia (IBV), CSICVerifisert e-postadresse på ibv.csic.es
Robert MoritzProfessor, Institute for Systems BiologyVerifisert e-postadresse på systemsbiology.org
Yansheng LiuYale University School of MedicineVerifisert e-postadresse på yale.edu
Holger EbhardtAnalytical Systems AnalystVerifisert e-postadresse på ucd.ie
Ching Chiek Koh, GeneWellcome Trust Sanger Institute, University of CambridgeVerifisert e-postadresse på cam.ac.uk
Amir Banaei-EsfahaniUniversity Hospital ZurichVerifisert e-postadresse på usz.ch
Graham RoseGreat Ormond Street Hospital NHSVerifisert e-postadresse på nhs.net
Kristine B. ArnvigLecturer University College LondonVerifisert e-postadresse på ucl.ac.uk
Johan MalmströmProfessor Infection medicine, Lund UniveristyVerifisert e-postadresse på med.lu.se

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Olga T. Schubert

Group Leader at Eawag, lecturer at ETH Zurich

Verifisert e-postadresse på eawag.ch

Systems Biology Genomics Proteomics Microbial Ecology


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OpenSWATH enables automated, targeted analysis of data-independent acquisition MS data HL Röst, G Rosenberger, P Navarro, L Gillet, SM Miladinović, ... Nature biotechnology 32 (3), 219-223, 2014	861	2014
A repository of assays to quantify 10,000 human proteins by SWATH-MS G Rosenberger, CC Koh, T Guo, HL Röst, P Kouvonen, BC Collins, ... Scientific data 1 (1), 1-15, 2014	463	2014
Building high-quality assay libraries for targeted analysis of SWATH MS data OT Schubert, LC Gillet, BC Collins, P Navarro, G Rosenberger, WE Wolski, ... Nature protocols 10 (3), 426-441, 2015	373	2015
Genome-wide mapping of transcriptional start sites defines an extensive leaderless transcriptome in Mycobacterium tuberculosis T Cortes, OT Schubert, G Rose, KB Arnvig, I Comas, R Aebersold, ... Cell reports 5 (4), 1121-1131, 2013	344	2013
Quantitative proteomics: challenges and opportunities in basic and applied research OT Schubert, HL Röst, BC Collins, G Rosenberger, R Aebersold Nature protocols 12 (7), 1289-1294, 2017	328	2017
The in silico human surfaceome D Bausch-Fluck, U Goldmann, S Müller, M van Oostrum, M Müller, ... Proceedings of the National Academy of Sciences 115 (46), E10988-E10997, 2018	325	2018
Absolute proteome composition and dynamics during dormancy and resuscitation of Mycobacterium tuberculosis OT Schubert, C Ludwig, M Kogadeeva, M Zimmermann, G Rosenberger, ... Cell host & microbe 18 (1), 96-108, 2015	232	2015
Cancer genetics-guided discovery of serum biomarker signatures for diagnosis and prognosis of prostate cancer I Cima, R Schiess, P Wild, M Kaelin, P Schüffler, V Lange, P Picotti, ... Proceedings of the National Academy of Sciences 108 (8), 3342-3347, 2011	230	2011
The Mtb proteome library: a resource of assays to quantify the complete proteome of Mycobacterium tuberculosis OT Schubert, J Mouritsen, C Ludwig, HL Röst, G Rosenberger, PK Arthur, ... Cell host & microbe 13 (5), 602-612, 2013	214	2013
From coarse to fine: the absolute Escherichia coli proteome under diverse growth conditions M Mori, Z Zhang, A Banaei‐Esfahani, JB Lalanne, H Okano, BC Collins, ... Molecular systems biology 17 (5), 1-23, 2021	105	2021
Breast cancer classification based on proteotypes obtained by SWATH mass spectrometry P Bouchal, OT Schubert, J Faktor, L Capkova, H Imrichova, K Zoufalova, ... Cell reports 28 (3), 832-843. e7, 2019	94	2019
A RanGTP-independent mechanism allows ribosomal protein nuclear import for ribosome assembly S Schütz, U Fischer, M Altvater, P Nerurkar, C Peña, M Gerber, Y Chang, ... Elife 3, e03473, 2014	73	2014
Comparative 'omics analyses differentiate Mycobacterium tuberculosis and Mycobacterium bovis and reveal distinct macrophage responses to infection with the … KM Malone, K Rue-Albrecht, DA Magee, K Conlon, OT Schubert, ... Microbial genomics 4 (3), e000163, 2018	70	2018
Systems-level proteomics of two ubiquitous leaf commensals reveals complementary adaptive traits for phyllosphere colonization DB Müller, OT Schubert, H Röst, R Aebersold, JA Vorholt Molecular & Cellular Proteomics 15 (10), 3256-3269, 2016	69	2016
Automated SWATH data analysis using targeted extraction of ion chromatograms HL Röst, R Aebersold, OT Schubert Proteomics, 289-307, 2017	53	2017
Delayed effects of transcriptional responses in Mycobacterium tuberculosis exposed to nitric oxide suggest other mechanisms involved in survival T Cortes, OT Schubert, A Banaei-Esfahani, BC Collins, R Aebersold, ... Scientific reports 7 (1), 8208, 2017	51	2017
Updated reference genome sequence and annotation of Mycobacterium bovis AF2122/97 KM Malone, D Farrell, TP Stuber, OT Schubert, R Aebersold, ... Genome announcements 5 (14), 10.1128/genomea. 00157-17, 2017	51	2017
The GTPase Nog1 co-ordinates the assembly, maturation and quality control of distant ribosomal functional centers P Klingauf-Nerurkar, LC Gillet, D Portugal-Calisto, M Oborská-Oplová, ... Elife 9, e52474, 2020	49*	2020
A Small RNA Encoded in the Rv2660c Locus of Mycobacterium tuberculosis Is Induced during Starvation and Infection J Houghton, T Cortes, O Schubert, G Rose, A Rodgers, M De Ste Croix, ... PloS one 8 (12), e80047, 2013	46	2013
Towards synthetic PETtrophy: Engineering Pseudomonas putida for concurrent polyethylene terephthalate (PET) monomer metabolism and PET hydrolase … OF Brandenberg, OT Schubert, L Kruglyak Microbial Cell Factories 21 (1), 119, 2022	40	2022

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