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Laurel Cooper
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The Gene Ontology resource: enriching a GOld mine
Nucleic acids research 49 (D1), D325-D334, 2021
29522021
The gene ontology knowledgebase in 2023
SA Aleksander, J Balhoff, S Carbon, JM Cherry, HJ Drabkin, D Ebert, ...
Genetics 224 (1), iyad031, 2023
9722023
Finding our way through phenotypes
AR Deans, SE Lewis, E Huala, SS Anzaldo, M Ashburner, JP Balhoff, ...
PLoS biology 13 (1), e1002033, 2015
2382015
The plant ontology as a tool for comparative plant anatomy and genomic analyses
L Cooper, RL Walls, J Elser, MA Gandolfo, DW Stevenson, B Smith, ...
Plant and Cell Physiology 54 (2), e1-e1, 2013
1922013
The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics
L Cooper, A Meier, MA Laporte, JL Elser, C Mungall, BT Sinn, D Cavaliere, ...
Nucleic Acids Research 46 (D1), D1168-D1180, 2017
1852017
Ontologies as integrative tools for plant science
RL Walls, B Athreya, L Cooper, J Elser, MA Gandolfo, P Jaiswal, ...
American journal of botany 99 (8), 1263-1275, 2012
1092012
An overview of the BioCreative 2012 Workshop Track III: interactive text mining task
CN Arighi, B Carterette, KB Cohen, M Krallinger, WJ Wilbur, P Fey, ...
Database 2013, bas056, 2013
852013
AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture
L Harper, J Campbell, EKS Cannon, S Jung, M Poelchau, R Walls, ...
Database 2018, bay088, 2018
832018
Towards a Reference Plant Trait Ontology for Modeling Knowledge of Plant Traits and Phenotypes.
E Arnaud, L Cooper, R Shrestha, N Menda, RT Nelson, L Matteis, ...
KEOD, 220-225, 2012
722012
High-frequency Ds remobilization over multiple generations in barley facilitates gene tagging in large genome cereals
J Singh, S Zhang, C Chen, L Cooper, P Bregitzer, A Sturbaum, PM Hayes, ...
Plant molecular biology 62, 937-950, 2006
692006
An ontology approach to comparative phenomics in plants
A Oellrich, RL Walls, EKS Cannon, SB Cannon, L Cooper, J Gardiner, ...
Plant methods 11, 1-15, 2015
682015
GrainGenes: a data-rich repository for small grains genetics and genomics
E Yao, VC Blake, L Cooper, CP Wight, S Michel, HB Cagirici, GR Lazo, ...
Database 2022, baac034, 2022
672022
The ontologies community of practice: a CGIAR initiative for big data in agrifood systems
E Arnaud, MA Laporte, S Kim, C Aubert, S Leonelli, B Miro, L Cooper, ...
Patterns 1 (7), 2020
662020
The Plant Ontology: a Tool for Plant Genomics
L Cooper, P Jaiswal
Plant Bioinformatics, 89-114, 2016
642016
The Plant Ontology Facilitates Comparisons of Plant Development Stages Across Species
RL Walls*, L Cooper*, JL Elser, MA Gandolfo, CJ Mungall, B Smith, ...
Frontiers in Plant Science 10, 2019
562019
Mapping Ds insertions in barley using a sequence-based approach
LD Cooper, L Marquez-Cedillo, J Singh, AK Sturbaum, S Zhang, ...
Molecular Genetics and Genomics 272, 181-193, 2004
522004
Sequencing of 15 622 gene‐bearing BAC s clarifies the gene‐dense regions of the barley genome
M Muñoz‐Amatriaín, S Lonardi, MC Luo, K Madishetty, JT Svensson, ...
The Plant Journal 84 (1), 216-227, 2015
472015
Text mining in the biocuration workflow: applications for literature curation at WormBase, dictyBase and TAIR
K Van Auken, P Fey, TZ Berardini, R Dodson, L Cooper, D Li, J Chan, Y Li, ...
Database 2012, 2012
462012
Application of Bruchin B to pea pods results in the up-regulation of CYP93C18, a putative isoflavone synthase gene, and an increase in the level of pisatin, an isoflavone …
LD Cooper, RP Doss, R Price, K Peterson, JE Oliver
Journal of experimental botany 56 (414), 1229-1237, 2005
422005
The Gene Ontology knowledgebase in 2023. GENETICS 224, iyad031
Gene Ontology Consortium, SA Aleksander, J Balhoff, S Carbon, ...
402023
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