Christian Rinke

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Philip HugenholtzAustralian Centre for Ecogenomics, SCMB, The University of QueenslandVerifisert e-postadresse på uq.edu.au
Donovan ParksUniversity of QueenslandVerifisert e-postadresse på uq.edu.au
Tanja WoykeDOE Joint Genome InstituteVerifisert e-postadresse på lbl.gov
Maria ChuvochinaAustralian Centre for Ecogenomics, The University of QueenslandVerifisert e-postadresse på uq.edu.au
Pierre-Alain ChaumeilBioinformatician, University of QueenslandVerifisert e-postadresse på uq.edu.au
Aaron J MussigThe University of QueenslandVerifisert e-postadresse på uq.edu.au
David W WaiteSenior Scientist, Ministry for Primary IndustriesVerifisert e-postadresse på mpi.govt.nz
Natalia IvanovaDOE Joint Genome InstituteVerifisert e-postadresse på lbl.gov
Brian HedlundUniversity of Nevada Las VegasVerifisert e-postadresse på unlv.edu
Gene W. TysonProfessor, Centre for Microbiome Research, Queensland University of TechnologyVerifisert e-postadresse på qut.edu.au
Ben J WoodcroftMicrobial informatics group leader, Centre for Microbiome Research, QUTVerifisert e-postadresse på qut.edu.au
Alexander SczyrbaForschungszentrum Jülich (IBG-5), Bielefeld University, Centrum for Biotechnology (CeBiTec)Verifisert e-postadresse på fz-juelich.de
Ramunas StepanauskasBigelow Laboratory for Ocean SciencesVerifisert e-postadresse på bigelow.org
Nikos C KyrpidesJoint Genome Institute, Lawrence Berkeley National LaboratoryVerifisert e-postadresse på lbl.gov
Wen-Tso LiuProfessor Emeritus, Civil and Environmental Engineering, University of Illinois at Urbana-ChampaignVerifisert e-postadresse på illinois.edu
Steven James HallamUniversity of British ColumbiaVerifisert e-postadresse på mail.ubc.ca
STEFAN SIEVERTWoods Hole Oceanographic InstitutionVerifisert e-postadresse på whoi.edu
Paul N EvansAustralian Centre for Ecogenomics, SCMB, The University of QueenslandVerifisert e-postadresse på uq.edu.au
Jan-Fang ChengStaff Scientist, Lawrence Berkeley National LaboratoryVerifisert e-postadresse på lbl.gov
Ute HentschelGEOMAR Helmholtz Centre for Ocean Research KielVerifisert e-postadresse på geomar.de

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Christian Rinke

Andre navnChris Rinke

Professor, University of Innsbruck, Austria & Honorary Associate Professor, UQ, Australia

Verifisert e-postadresse på uibk.ac.at - Startside

microbial evolution & ecology multi-omics microbial plastic degradation biorecycling superworm


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A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life DH Parks, M Chuvochina, DW Waite, C Rinke, A Skarshewski, ... Nature biotechnology 36 (10), 996-1004, 2018	3102	2018
Insights into the phylogeny and coding potential of microbial dark matter C Rinke, P Schwientek, A Sczyrba, NN Ivanova, IJ Anderson, JF Cheng, ... Nature 499 (7459), 431-437, 2013	2497	2013
Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea RM Bowers, NC Kyrpides, R Stepanauskas, M Harmon-Smith, D Doud, ... Nature biotechnology 35 (8), 725-731, 2017	1843	2017
Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life DH Parks, C Rinke, M Chuvochina, PA Chaumeil, BJ Woodcroft, ... Nature microbiology 2 (11), 1533-1542, 2017	1713	2017
GTDB: an ongoing census of bacterial and archaeal diversity through a phylogenetically consistent, rank normalized and complete genome-based taxonomy DH Parks, M Chuvochina, C Rinke, AJ Mussig, PA Chaumeil, ... Nucleic acids research 50 (D1), D785-D794, 2022	1340	2022
A complete domain-to-species taxonomy for Bacteria and Archaea DH Parks, M Chuvochina, PA Chaumeil, C Rinke, AJ Mussig, ... Nature biotechnology 38 (9), 1079-1086, 2020	1241	2020
A genomic catalog of Earth’s microbiomes S Nayfach, S Roux, R Seshadri, D Udwary, N Varghese, F Schulz, D Wu, ... Nature biotechnology 39 (4), 499-509, 2021	722	2021
An environmental bacterial taxon with a large and distinct metabolic repertoire MC Wilson, T Mori, C Rückert, AR Uria, MJ Helf, K Takada, C Gernert, ... Nature 506 (7486), 58-62, 2014	645	2014
Comparative Genomic Analysis of the Class Epsilonproteobacteria and Proposed Reclassification to Epsilonbacteraeota (phyl. nov.) DW Waite, I Vanwonterghem, C Rinke, DH Parks, Y Zhang, K Takai, ... Frontiers in microbiology 8, 682, 2017	424*	2017
Microbial dark matter ecogenomics reveals complex synergistic networks in a methanogenic bioreactor MK Nobu, T Narihiro, C Rinke, Y Kamagata, SG Tringe, T Woyke, WT Liu The ISME journal 9 (8), 1710-1722, 2015	399	2015
A standardized archaeal taxonomy for the Genome Taxonomy Database C Rinke, M Chuvochina, AJ Mussig, PA Chaumeil, AA Davín, DW Waite, ... Nature microbiology 6 (7), 946-959, 2021	347*	2021
Obtaining genomes from uncultivated environmental microorganisms using FACS–based single-cell genomics C Rinke, J Lee, N Nath, D Goudeau, B Thompson, N Poulton, E Dmitrieff, ... Nature protocols 9 (5), 1038-1048, 2014	320	2014
Decontamination of MDA reagents for single cell whole genome amplification T Woyke, A Sczyrba, J Lee, C Rinke, D Tighe, S Clingenpeel, ... PloS one 6 (10), e26161, 2011	186	2011
Phylogeny and physiology of candidate phylum ‘Atribacteria’(OP9/JS1) inferred from cultivation-independent genomics MK Nobu, JA Dodsworth, SK Murugapiran, C Rinke, EA Gies, G Webster, ... The ISME journal 10 (2), 273-286, 2016	180	2016
A phylogenomic and ecological analysis of the globally abundant Marine Group II archaea (Ca. Poseidoniales ord. nov.) C Rinke, F Rubino, LF Messer, N Youssef, DH Parks, M Chuvochina, ... The ISME journal 13 (3), 663-675, 2019	171	2019
Stop codon reassignments in the wild NN Ivanova, P Schwientek, HJ Tripp, C Rinke, A Pati, M Huntemann, ... Science 344 (6186), 909-913, 2014	158	2014
Impact of single-cell genomics and metagenomics on the emerging view of extremophile “microbial dark matter” BP Hedlund, JA Dodsworth, SK Murugapiran, C Rinke, T Woyke Extremophiles 18, 865-875, 2014	155	2014
Single-cell genomics reveals complex carbohydrate degradation patterns in poribacterial symbionts of marine sponges J Kamke, A Sczyrba, N Ivanova, P Schwientek, C Rinke, K Mavromatis, ... The ISME journal 7 (12), 2287-2300, 2013	146	2013
Diverse Marinimicrobia bacteria may mediate coupled biogeochemical cycles along eco-thermodynamic gradients AK Hawley, MK Nobu, JJ Wright, WE Durno, C Morgan-Lang, B Sage, ... Nature Communications 8 (1), 1507, 2017	135	2017
In Silico Analysis of the Metabolic Potential and Niche Specialization of Candidate Phylum "Latescibacteria" (WS3) NH Youssef, IF Farag, C Rinke, SJ Hallam, T Woyke, MS Elshahed PloS one 10 (6), e0127499, 2015	122	2015

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