An African origin for the intimate association between humans and Helicobacter pylori B Linz, F Balloux, Y Moodley, A Manica, H Liu, P Roumagnac, D Falush, ... Nature 445 (7130), 915-918, 2007 | 1249 | 2007 |
ICTV Virus Taxonomy Profile: Geminiviridae FM Zerbini, RW Briddon, A Idris, DP Martin, E Moriones, J Navas-Castillo, ... Journal of general virology 98 (2), 131-133, 2017 | 919 | 2017 |
Yersinia pestis genome sequencing identifies patterns of global phylogenetic diversity G Morelli, Y Song, CJ Mazzoni, M Eppinger, P Roumagnac, DM Wagner, ... Nature genetics 42 (12), 1140-1143, 2010 | 691 | 2010 |
High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi KE Holt, J Parkhill, CJ Mazzoni, P Roumagnac, FX Weill, I Goodhead, ... Nature genetics 40 (8), 987-993, 2008 | 592 | 2008 |
Evolutionary history of Salmonella typhi P Roumagnac, FX Weill, C Dolecek, S Baker, S Brisse, NT Chinh, TAH Le, ... Science 314 (5803), 1301-1304, 2006 | 456 | 2006 |
RDP5: a computer program for analyzing recombination in, and removing signals of recombination from, nucleotide sequence datasets DP Martin, A Varsani, P Roumagnac, G Botha, S Maslamoney, T Schwab, ... Virus evolution 7 (1), veaa087, 2021 | 437 | 2021 |
Plant virus metagenomics: advances in virus discovery MJ Roossinck, DP Martin, P Roumagnac Phytopathology 105 (6), 716-727, 2015 | 432 | 2015 |
Shifting the paradigm from pathogens to pathobiome: new concepts in the light of meta-omics M Vayssier-Taussat, E Albina, C Citti, JF Cosson, MA Jacques, ... Frontiers in cellular and infection microbiology 4, 29, 2014 | 347 | 2014 |
Frequent emergence and limited geographic dispersal of methicillin-resistant Staphylococcus aureus U Nübel, P Roumagnac, M Feldkamp, JH Song, KS Ko, YC Huang, ... Proceedings of the National Academy of Sciences 105 (37), 14130-14135, 2008 | 329 | 2008 |
Capulavirus and Grablovirus: two new genera in the family Geminiviridae A Varsani, P Roumagnac, M Fuchs, J Navas-Castillo, E Moriones, A Idris, ... Archives of Virology 162, 1819-1831, 2017 | 297 | 2017 |
Transpiration of a 64-year-old maritime pine stand in Portugal: 1. Seasonal course of water flux through maritime pine D Loustau, P Berbigier, P Roumagnac, C Arruda-Pacheco, JS David, ... Oecologia 107, 33-42, 1996 | 296 | 1996 |
Evolution and ecology of plant viruses P Lefeuvre, DP Martin, SF Elena, DN Shepherd, P Roumagnac, A Varsani Nature Reviews Microbiology 17 (10), 632-644, 2019 | 249 | 2019 |
Recombination in eukaryotic single stranded DNA viruses DP Martin, P Biagini, P Lefeuvre, M Golden, P Roumagnac, A Varsani Viruses 3 (9), 1699-1738, 2011 | 231 | 2011 |
ICTV Virus Taxonomy Profile: Geminiviridae 2021 E Fiallo-Olivé, JM Lett, DP Martin, P Roumagnac, A Varsani, FM Zerbini, ... Journal of General Virology 102 (12), 001696, 2021 | 202 | 2021 |
Geometagenomics illuminates the impact of agriculture on the distribution and prevalence of plant viruses at the ecosystem scale P Bernardo, T Charles-Dominique, M Barakat, P Ortet, E Fernandez, ... The ISME journal 12 (1), 173-184, 2018 | 168 | 2018 |
Alphasatellitidae: a new family with two subfamilies for the classification of geminivirus- and nanovirus-associated alphasatellites RW Briddon, DP Martin, P Roumagnac, J Navas-Castillo, E Fiallo-Olivé, ... Archives of virology 163, 2587-2600, 2018 | 155 | 2018 |
Evolution and Population Structure of Salmonella enterica Serovar Newport V Sangal, H Harbottle, CJ Mazzoni, R Helmuth, B Guerra, X Didelot, ... Journal of bacteriology 192 (24), 6465-6476, 2010 | 134 | 2010 |
Appearances can be deceptive: revealing a hidden viral infection with deep sequencing in a plant quarantine context T Candresse, D Filloux, B Muhire, C Julian, S Galzi, G Fort, P Bernardo, ... PLoS One 9 (7), e102945, 2014 | 113 | 2014 |
Illuminating an ecological blackbox: using high throughput sequencing to characterize the plant virome across scales F Maclot, T Candresse, D Filloux, CM Malmstrom, P Roumagnac, ... Frontiers in Microbiology 11, 578064, 2020 | 96 | 2020 |
High-Throughput Genotyping of Salmonella enterica Serovar Typhi Allowing Geographical Assignment of Haplotypes and Pathotypes within an Urban District of … S Baker, K Holt, E Van de Vosse, P Roumagnac, S Whitehead, E King, ... Journal of clinical microbiology 46 (5), 1741-1746, 2008 | 94 | 2008 |