| One thousand plant transcriptomes and the phylogenomics of green plants Nature 574 (7780), 679-685, 2019 | 1422 | 2019 |
| Phylotranscriptomic analysis of the origin and early diversification of land plants NJ Wickett, S Mirarab, N Nguyen, T Warnow, E Carpenter, N Matasci, ... Proceedings of the National Academy of Sciences 111 (45), E4859-E4868, 2014 | 1300 | 2014 |
| Data access for the 1,000 Plants (1KP) project N Matasci, LH Hung, Z Yan, EJ Carpenter, NJ Wickett, S Mirarab, ... Gigascience 3 (1), 2047-217X-3-17, 2014 | 604 | 2014 |
| PASTA: ultra-large multiple sequence alignment S Mirarab, N Nguyen, T Warnow Research in Computational Molecular Biology: 18th Annual International …, 2014 | 521 | 2014 |
| Circular ecDNA promotes accessible chromatin and high oncogene expression S Wu, KM Turner, N Nguyen, R Raviram, M Erb, J Santini, J Luebeck, ... Nature 575 (7784), 699-703, 2019 | 484 | 2019 |
| Extrachromosomal DNA is associated with oncogene amplification and poor outcome across multiple cancers H Kim, NP Nguyen, K Turner, S Wu, AD Gujar, J Luebeck, J Liu, ... Nature genetics 52 (9), 891-897, 2020 | 392 | 2020 |
| A perspective on 16S rRNA operational taxonomic unit clustering using sequence similarity NP Nguyen, T Warnow, M Pop, B White NPJ biofilms and microbiomes 2 (1), 1-8, 2016 | 347 | 2016 |
| SEPP: SATé-enabled phylogenetic placement S Mirarab, N Nguyen, T Warnow Biocomputing 2012, 247-258, 2012 | 273 | 2012 |
| Exploring the landscape of focal amplifications in cancer using AmpliconArchitect V Deshpande, J Luebeck, NPD Nguyen, M Bakhtiari, KM Turner, ... Nature communications 10 (1), 392, 2019 | 260 | 2019 |
| Global phylogeography and ancient evolution of the widespread human gut virus crAssphage RA Edwards, AA Vega, HM Norman, M Ohaeri, K Levi, EA Dinsdale, ... Nature microbiology 4 (10), 1727-1736, 2019 | 237 | 2019 |
| Ultra-large alignments using phylogeny-aware profiles ND Nguyen, S Mirarab, K Kumar, T Warnow Genome biology 16, 1-15, 2015 | 151 | 2015 |
| iBioSim: a tool for the analysis and design of genetic circuits CJ Myers, N Barker, K Jones, H Kuwahara, C Madsen, NPD Nguyen Bioinformatics 25 (21), 2848-2849, 2009 | 138 | 2009 |
| TIPP: taxonomic identification and phylogenetic profiling N Nguyen, S Mirarab, B Liu, M Pop, T Warnow Bioinformatics 30 (24), 3548-3555, 2014 | 120 | 2014 |
| MRL and SuperFine+ MRL: new supertree methods N Nguyen, S Mirarab, T Warnow Algorithms for Molecular Biology 7, 1-13, 2012 | 92 | 2012 |
| Phylogenomics from whole genome sequences using aTRAM JM Allen, B Boyd, NP Nguyen, P Vachaspati, T Warnow, DI Huang, ... Systematic Biology 66 (5), 786-798, 2017 | 81 | 2017 |
| ViFi: accurate detection of viral integration and mRNA fusion reveals indiscriminate and unregulated transcription in proximal genomic regions in cervical cancer NPD Nguyen, V Deshpande, J Luebeck, PS Mischel, V Bafna Nucleic acids research 46 (7), 3309-3325, 2018 | 62 | 2018 |
| Primates, lice and bacteria: speciation and genome evolution in the symbionts of hominid lice BM Boyd, JM Allen, NP Nguyen, P Vachaspati, ZS Quicksall, T Warnow, ... Molecular Biology and Evolution 34 (7), 1743-1757, 2017 | 62 | 2017 |
| Longitudinal assessment of tumor development using cancer avatars derived from genetically engineered pluripotent stem cells T Koga, IA Chaim, JA Benitez, S Markmiller, AD Parisian, RF Hevner, ... Nature communications 11 (1), 550, 2020 | 56 | 2020 |
| Simultaneous radiation of bird and mammal lice following the K-Pg boundary KP Johnson, N Nguyen, AD Sweet, BM Boyd, T Warnow, JM Allen Biology letters 14 (5), 20180141, 2018 | 52 | 2018 |
| Metastable nonextremal antibranes J Armas, N Nguyen, V Niarchos, NA Obers, T Van Riet Physical Review Letters 122 (18), 181601, 2019 | 45 | 2019 |
Tandy WarnowGrainger Distinguished Chair in Engineering, UIUCZweryfikowany adres z illinois.edu