Ecology and genomics of an important crop wild relative as a prelude to agricultural innovation EJB Von Wettberg, PL Chang, F Başdemir, N Carrasquila-Garcia, ... Nature communications 9 (1), 649, 2018 | 207 | 2018 |
Genomic basis of aging and life‐history evolution in Drosophila melanogaster SC Remolina, PL Chang, J Leips, SV Nuzhdin, KA Hughes Evolution 66 (11), 3390-3403, 2012 | 150 | 2012 |
A versatile method for cell-specific profiling of translated mRNAs in Drosophila A Thomas, PJ Lee, JE Dalton, KJ Nomie, L Stoica, M Costa-Mattioli, ... PloS one 7 (7), e40276, 2012 | 129 | 2012 |
De Novo Assembly of the Manila Clam Ruditapes philippinarum Transcriptome Provides New Insights into Expression Bias, Mitochondrial Doubly Uniparental … F Ghiselli, L Milani, PL Chang, D Hedgecock, JP Davis, SV Nuzhdin, ... Molecular biology and evolution 29 (2), 771-786, 2012 | 119 | 2012 |
Global-level population genomics reveals differential effects of geography and phylogeny on horizontal gene transfer in soil bacteria A Greenlon, PL Chang, ZM Damtew, A Muleta, N Carrasquilla-Garcia, ... Proceedings of the National Academy of Sciences 116 (30), 15200-15209, 2019 | 110 | 2019 |
Ultralow-input single-tube linked-read library method enables short-read second-generation sequencing systems to routinely generate highly accurate and economical long-range … Z Chen, L Pham, TC Wu, G Mo, Y Xia, PL Chang, D Porter, T Phan, H Che, ... Genome Research 30 (6), 898-909, 2020 | 103 | 2020 |
Homoeolog-specific retention and use in allotetraploid Arabidopsis suecica depends on parent of origin and network partners PL Chang, BP Dilkes, M McMahon, L Comai, SV Nuzhdin Genome biology 11, 1-17, 2010 | 103 | 2010 |
Somatic sex-specific transcriptome differences in Drosophila revealed by whole transcriptome sequencing PL Chang, JP Dunham, SV Nuzhdin, MN Arbeitman BMC genomics 12, 1-20, 2011 | 94 | 2011 |
Association mapping reveals novel serpentine adaptation gene clusters in a population of symbiotic Mesorhizobium SS Porter, PL Chang, CA Conow, JP Dunham, ML Friesen The ISME journal 11 (1), 248-262, 2017 | 92 | 2017 |
Structure, transcription, and variability of metazoan mitochondrial genome: perspectives from an unusual mitochondrial inheritance system F Ghiselli, L Milani, D Guerra, PL Chang, S Breton, SV Nuzhdin, ... Genome biology and evolution 5 (8), 1535-1554, 2013 | 87 | 2013 |
Genetic variation of transgenerational plasticity of offspring germination in response to salinity stress and the seed transcriptome of Medicago truncatula WT Vu, PL Chang, KS Moriuchi, ML Friesen BMC evolutionary biology 15, 1-14, 2015 | 81 | 2015 |
A de novo transcriptome assembly of Lucilia sericata (Diptera: Calliphoridae) with predicted alternative splices, single nucleotide polymorphisms and transcript expression … SH Sze, JP Dunham, B Carey, PL Chang, F Li, RM Edman, C Fjeldsted, ... Insect molecular biology 21 (2), 205-221, 2012 | 80 | 2012 |
Races of the Celery Pathogen Fusarium oxysporum f. sp. apii Are Polyphyletic L Epstein, S Kaur, PL Chang, N Carrasquilla-Garcia, G Lyu, DR Cook, ... Phytopathology 107 (4), 463-473, 2017 | 61 | 2017 |
The ecological genomic basis of salinity adaptation in Tunisian Medicago truncatula ML Friesen, EJB von Wettberg, M Badri, KS Moriuchi, F Barhoumi, ... BMC genomics 15, 1-18, 2014 | 57 | 2014 |
Genomic changes under rapid evolution: selection for parasitoid resistance KM Jalvingh, PL Chang, SV Nuzhdin, B Wertheim Proceedings of the Royal Society B: Biological Sciences 281 (1779), 20132303, 2014 | 57 | 2014 |
Distinct Subgroups of Cicer echinospermum Are Associated with Hybrid Sterility and Breakdown in Interspecific Crosses with Cultivated Chickpea A Kahraman, A Pandey, MK Khan, D Lindsay, S Moenga, L Vance, ... Crop Science 57 (6), 3101-3111, 2017 | 47 | 2017 |
Genomic exaptation enables Lasius niger adaptation to urban environments EA Konorov, MA Nikitin, KV Mikhailov, SN Lysenkov, M Belenky, ... BMC evolutionary biology 17, 1-12, 2017 | 46 | 2017 |
Development of F1 hybrid population and the high-density linkage map for European aspen (Populus tremula L.) using RADseq technology AV Zhigunov, PS Ulianich, MV Lebedeva, PL Chang, SV Nuzhdin, ... BMC plant biology 17, 1-12, 2017 | 43 | 2017 |
Identification of gene expression changes associated with long-term memory of courtship rejection in Drosophila males A Winbush, D Reed, PL Chang, SV Nuzhdin, LC Lyons, MN Arbeitman G3: Genes, Genomes, Genetics 2 (11), 1437-1445, 2012 | 40 | 2012 |
Evolutionary genomics of Culex pipiens: global and local adaptations associated with climate, life-history traits and anthropogenic factors H Asgharian, PL Chang, S Lysenkov, VA Scobeyeva, WK Reisen, ... Proceedings of the Royal Society B: Biological Sciences 282 (1810), 20150728, 2015 | 39 | 2015 |