| Plant protein-protein interaction network and interactome Y Zhang, P Gao, JS Yuan Current genomics 11 (1), 40-46, 2010 | 150 | 2010 |
| JAZ7 negatively regulates dark-induced leaf senescence in Arabidopsis J Yu, Y Zhang, C Di, Q Zhang, K Zhang, C Wang, Q You, H Yan, SY Dai, ... Journal of experimental botany 67 (3), 751-762, 2016 | 128 | 2016 |
| Sulfide-responsive transcriptional repressor SqrR functions as a master regulator of sulfide-dependent photosynthesis T Shimizu, J Shen, M Fang, Y Zhang, K Hori, JC Trinidad, CE Bauer, ... Proceedings of the National Academy of Sciences 114 (9), 2355-2360, 2017 | 92 | 2017 |
| Hydrogen Sulfide and Reactive Sulfur Species Impact Proteome S-Sulfhydration and Global Virulence Regulation in Staphylococcus aureus H Peng, Y Zhang, LD Palmer, TE Kehl-Fie, EP Skaar, JC Trinidad, ... ACS infectious diseases 3 (10), 744-755, 2017 | 90 | 2017 |
| AvrRpm1 functions as an ADP-ribosyl transferase to modify NOI domain-containing proteins, including Arabidopsis and soybean RPM1-interacting protein4 TJ Redditt, EH Chung, HZ Karimi, N Rodibaugh, Y Zhang, JC Trinidad, ... The Plant Cell 31 (11), 2664-2681, 2019 | 83 | 2019 |
| Multi-metal restriction by calprotectin impacts de novo flavin biosynthesis in Acinetobacter baumannii J Wang, ZR Lonergan, G Gonzalez-Gutierrez, BL Nairn, CN Maxwell, ... Cell chemical biology 26 (5), 745-755. e7, 2019 | 69 | 2019 |
| Staphylococcus aureus sqr Encodes a Type II Sulfide:Quinone Oxidoreductase and Impacts Reactive Sulfur Speciation in Cells J Shen, H Peng, Y Zhang, JC Trinidad, DP Giedroc Biochemistry 55 (47), 6524-6534, 2016 | 56 | 2016 |
| HDX-analyzer: a novel package for statistical analysis of protein structure dynamics S Liu, L Liu, U Uzuner, X Zhou, M Gu, W Shi, Y Zhang, SY Dai, JS Yuan BMC bioinformatics 12, 1-10, 2011 | 46 | 2011 |
| The Response of Acinetobacter baumannii to Hydrogen Sulfide Reveals Two Independent Persulfide-Sensing Systems and a Connection to Biofilm Regulation BJC Walsh, J Wang, KA Edmonds, LD Palmer, Y Zhang, JC Trinidad, ... MBio 11 (3), 10.1128/mbio. 01254-20, 2020 | 45 | 2020 |
| Distinguishing sulfotyrosine containing peptides from their phosphotyrosine counterparts using mass spectrometry G Chen, Y Zhang, JC Trinidad, C Dann III Journal of the American Society for Mass Spectrometry 29 (3), 455-462, 2018 | 43 | 2018 |
| Hydrogen Sulfide Sensing through Reactive Sulfur Species (RSS) and Nitroxyl (HNO) in Enterococcus faecalis J Shen, BJC Walsh, AL Flores-Mireles, H Peng, Y Zhang, Y Zhang, ... ACS chemical biology 13 (6), 1610-1620, 2018 | 41 | 2018 |
| Application of an improved proteomics method for abundant protein cleanup: molecular and genomic mechanisms study in plant defense Y Zhang, P Gao, Z Xing, S Jin, Z Chen, L Liu, N Constantino, X Wang, ... Molecular & Cellular Proteomics 12 (11), 3431-3442, 2013 | 35 | 2013 |
| Thioredoxin Profiling of Multiple Thioredoxin-Like Proteins in Staphylococcus aureus H Peng, Y Zhang, JC Trinidad, DP Giedroc Frontiers in Microbiology 9, 2385, 2018 | 28 | 2018 |
| Integration of shot-gun proteomics and bioinformatics analysis to explore plant hormone responses Y Zhang, S Liu, SY Dai, JS Yuan Bmc Bioinformatics 13, 1-11, 2012 | 23 | 2012 |
| Assembly of a dsRNA synthesizing complex: RNA-DEPENDENT RNA POLYMERASE 2 contacts the largest subunit of NUCLEAR RNA POLYMERASE IV V Mishra, J Singh, F Wang, Y Zhang, A Fukudome, JC Trinidad, Y Takagi, ... Proceedings of the National Academy of Sciences 118 (13), e2019276118, 2021 | 19 | 2021 |
| Comparative proteomics analysis of differential proteins in response to 6-benzylaminopurine treatment in Pteridium aquilinum senescence J Huang, Y Zhang, L Jiang, Z Yu Postharvest Biology and Technology 116, 66-74, 2016 | 15 | 2016 |
| Deciphering the mechanism of processive ssDNA digestion by the Dna2-RPA ensemble J Shen, Y Zhao, NT Pham, Y Li, Y Zhang, J Trinidad, G Ira, Z Qi, H Niu Nature Communications 13 (1), 359, 2022 | 12 | 2022 |
| The BORDER family of negative transcription elongation factors regulates flowering time in Arabidopsis X Yu, PGP Martin, Y Zhang, JC Trinidad, F Xu, J Huang, KE Thum, K Li, ... Current Biology 31 (23), 5377-5384. e5, 2021 | 11 | 2021 |
| Identification of a substrate-like cleavage-resistant thrombin inhibitor from the saliva of the flea Xenopsylla cheopis S Lu, L Tirloni, MB Oliveira, CF Bosio, GA Nardone, Y Zhang, ... Journal of Biological Chemistry 297 (5), 2021 | 9 | 2021 |
| Chlamydia trachomatis alters mitochondrial protein composition and secretes effector proteins that target mitochondria Z Dimond, LD Bauler, Y Zhang, A Carmody, T Hackstadt Msphere 7 (6), e00423-22, 2022 | 7 | 2022 |