| Evaluation of model refinement in CASP14 AJ Simpkin, F Sanchez Rodriguez, S Mesdaghi, A Kryshtafovych, ... Proteins: Structure, Function, and Bioinformatics 89 (12), 1852-1869, 2021 | 28 | 2021 |
| Tertiary structure assessment at CASP15 AJ Simpkin, S Mesdaghi, F Sánchez Rodríguez, L Elliott, DL Murphy, ... Proteins: Structure, Function, and Bioinformatics 91 (12), 1616-1635, 2023 | 27 | 2023 |
| In silico prediction of structure and function for a large family of transmembrane proteins that includes human Tmem41b S Mesdaghi, DL Murphy, FS Rodríguez, JJ Burgos-Mármol, DJ Rigden F1000Research 9, 1395, 2021 | 21 | 2021 |
| Breaking the conformational ensemble barrier: Ensemble structure modeling challenges in CASP15 A Kryshtafovych, GT Montelione, DJ Rigden, S Mesdaghi, E Karaca, ... Proteins: Structure, Function, and Bioinformatics 91 (12), 1903-1911, 2023 | 16 | 2023 |
| Deep Learning-based structure modelling illuminates structure and function in uncharted regions of β-solenoid fold space S Mesdaghi, RM Price, J Madine, DJ Rigden Journal of Structural Biology 215 (3), 108010, 2023 | 9 | 2023 |
| ConPlot: web-based application for the visualization of protein contact maps integrated with other data F Sánchez Rodríguez, S Mesdaghi, AJ Simpkin, JJ Burgos-Mármol, ... Bioinformatics 37 (17), 2763-2765, 2021 | 8 | 2021 |
| Structural insights into pink-eyed dilution protein (Oca2) S Mesdaghi, DL Murphy, AJ Simpkin, DJ Rigden Bioscience Reports 43 (7), 2023 | 4 | 2023 |
| Functional Characterization of Splice Variants in the Diagnosis of Albinism M Diallo, C Courdier, E Mercier, A Sequeira, A Defay-Stinat, C Plaisant, ... International Journal of Molecular Sciences 25 (16), 8657, 2024 | 2 | 2024 |
| Investigating Medin Cleavage Accessibility in MfgE8: Conformational Insights Derived from Molecular Dynamics Simulations and AlphaFold2 Models S Mesdaghi, R Price, M Li, RQ Migrino, J Madine, DJ Rigden bioRxiv, 2024 | 1 | 2024 |
| Bacterial polysaccharide lyase family 33: Specificity from an evolutionarily conserved binding tunnel M Loiodice, E Drula, Z McIver, S Antonyuk, A Baslé, M Lima, EA Yates, ... Proceedings of the National Academy of Sciences 122 (7), e2421623122, 2025 | | 2025 |
| AlphaFold 2, but not AlphaFold 3, predicts confident but unrealistic β-solenoid structures for repeat proteins OS Pratt, LG Elliott, M Haon, S Mesdaghi, RM Price, AJ Simpkin, ... Computational and structural biotechnology journal, 2025 | | 2025 |
| Deep-learning protein structure predictions suggest likely molecular functions for three uncharacterised polytopic membrane proteins from the P. falciparum apicoplast DL Murphy, S Mesdaghi, FS Rodríguez, AJ Simpkin, L Elliott, DJ Rigden bioRxiv, 2024.04. 13.589297, 2024 | | 2024 |
| Deep Learning-based structural and functional annotation of Pandoravirus hypothetical proteins JL Horder, AJ Connor, AL Duggan, JJ Hale, FJ McDermott, LE Norris, ... bioRxiv, 2023.12. 02.569716, 2023 | | 2023 |
| Exploiting Advanced Methods for Membrane Protein Structure Prediction S Mesdaghi PQDT-Global, 2023 | | 2023 |
