Benoit Ballester

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Anthony MathelierAssociate Director and Group Leader, Centre for Molecular Medicine Norway (NCMM)Adresă de e-mail confirmată pe ncmm.uio.no
Marius GheorghePhD candidate, Norwegian Centre for Molecular Medicine, University of OsloAdresă de e-mail confirmată pe ncmm.uio.no
Boris LenhardImperial College LondonAdresă de e-mail confirmată pe imperial.ac.uk
Albin SandelinThe Bioinformatics Centre, Department of Biology & BRIC, Copenhagen University, DenmarkAdresă de e-mail confirmată pe binf.ku.dk
Wyeth WassermanProfessor of Medical Genetics, University of British ColumbiaAdresă de e-mail confirmată pe cmmt.ubc.ca
François ParcyCNRS, Grenoble-Alpes University, CEA, INRAE, Grenoble, FranceAdresă de e-mail confirmată pe cnrs.fr
Paul FlicekThe Jackson Laboratory, University of CambridgeAdresă de e-mail confirmată pe jax.org
Michael D. WilsonUniversity of Toronto and SickKids Research InstituteAdresă de e-mail confirmată pe sickkids.ca
Duncan T OdomUniversity of Heidelberg & German Cancer Research Center/DKFZAdresă de e-mail confirmată pe dkfz-heidelberg.de
Claudia KutterPrincipal Investigator, Karolinska Institute and SciLifeLab fellow, Science for Life LaboratoryAdresă de e-mail confirmată pe ki.se
Dominic SchmidtPartner at SynconaAdresă de e-mail confirmată pe wellcome.ac.uk
Arek KasprzykAdresă de e-mail confirmată pe hsr.it
Damian SmedleyQueen Mary University of LondonAdresă de e-mail confirmată pe qmul.ac.uk
Stephen WattSanger InstituteAdresă de e-mail confirmată pe sanger.ac.uk
Gudmundur A ThorissondeCODE Genetics, IcelandAdresă de e-mail confirmată pe decode.is
Jacques van HeldenAix-Marseille UniversitéAdresă de e-mail confirmată pe univ-amu.fr
Laura ClarkeHealth Informatics EastAdresă de e-mail confirmată pe healthinnovationeast.co.uk

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Benoit Ballester

INSERM - National Institute of Health and Medical Research

Adresă de e-mail confirmată pe inserm.fr

bioinformatics genomics transcription factors cancer genomics sequencing


Titlu Sortați după descrierea bibliografică Sortați după an Sortați după titlu	Citat de Citat de	Anul
Ensembl 2008 P Flicek, BL Aken, K Beal, B Ballester, M Caccamo, Y Chen, L Clarke, ... Nucleic Acids Research 36, 2008	2947*	2008
JASPAR 2020: update of the open-access database of transcription factor binding profiles O Fornes, JA Castro-Mondragon, A Khan, R Van der Lee, X Zhang, ... Nucleic acids research 48 (D1), D87-D92, 2020	1956	2020
JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework A Khan, O Fornes, A Stigliani, M Gheorghe, JA Castro-Mondragon, ... Nucleic acids research 46 (D1), D260-D266, 2018	1717	2018
JASPAR 2022: the 9th release of the open-access database of transcription factor binding profiles JA Castro-Mondragon, R Riudavets-Puig, I Rauluseviciute, ... Nucleic acids research 50 (D1), D165-D173, 2022	1506	2022
BioMart–biological queries made easy D Smedley, S Haider, B Ballester, R Holland, D London, G Thorisson, ... BMC genomics 10, 1-12, 2009	1062	2009
Ensembl 2009 TJP Hubbard, BL Aken, S Ayling, B Ballester, K Beal, E Bragin, S Brent, ... Nucleic acids research 37 (suppl_1), D690-D697, 2009	981	2009
Ensembl 2007 TJP Hubbard, BL Aken, K Beal, B Ballester, M Cáccamo, Y Chen, ... Nucleic acids research 35 (suppl_1), D610-D617, 2007	957	2007
Five-vertebrate ChIP-seq reveals the evolutionary dynamics of transcription factor binding D Schmidt, MD Wilson, B Ballester, PC Schwalie, GD Brown, A Marshall, ... Science 328 (5981), 1036-1040, 2010	861	2010
Waves of retrotransposon expansion remodel genome organization and CTCF binding in multiple mammalian lineages D Schmidt, PC Schwalie, MD Wilson, B Ballester, Â Gonçalves, C Kutter, ... Cell 148 (1), 335-348, 2012	671	2012
BioMart Central Portal—unified access to biological data S Haider, B Ballester, D Smedley, J Zhang, P Rice, A Kasprzyk Nucleic acids research 37 (suppl_2), W23-W27, 2009	416	2009
Ensembl's 10th year P Flicek, BL Aken, B Ballester, K Beal, E Bragin, S Brent, Y Chen, ... Nucleic acids research 38 (suppl_1), D557-D562, 2010	373	2010
ReMap 2022: a database of Human, Mouse, Drosophila and Arabidopsis regulatory regions from an integrative analysis of DNA-binding sequencing experiments F Hammal, P De Langen, A Bergon, F Lopez, B Ballester Nucleic acids research 50 (D1), D316-D325, 2022	289	2022
ReMap 2018: an updated atlas of regulatory regions from an integrative analysis of DNA-binding ChIP-seq experiments J Chèneby, M Gheorghe, M Artufel, A Mathelier, B Ballester Nucleic acids research 46 (D1), D267-D275, 2018	236	2018
The chromatin environment shapes DNA replication origin organization and defines origin classes C Cayrou, B Ballester, I Peiffer, R Fenouil, P Coulombe, JC Andrau, ... Genome research 25 (12), 1873-1885, 2015	192	2015
Gene expression profiling identifies molecular subgroups among nodal peripheral T-cell lymphomas B Ballester, O Ramuz, C Gisselbrecht, G Doucet, L Loi, B Loriod, ... Oncogene 25 (10), 1560-1570, 2006	173	2006
Involvement of G-quadruplex regions in mammalian replication origin activity P Prorok, M Artufel, A Aze, P Coulombe, I Peiffer, L Lacroix, A Guédin, ... Nature communications 10 (1), 3274, 2019	161	2019
ReMap 2020: a database of regulatory regions from an integrative analysis of Human and Arabidopsis DNA-binding sequencing experiments J Chèneby, Z Ménétrier, M Mestdagh, T Rosnet, A Douida, W Rhalloussi, ... Nucleic acids research 48 (D1), D180-D188, 2020	159	2020
High-throughput and quantitative assessment of enhancer activity in mammals by CapStarr-seq L Vanhille, A Griffon, MA Maqbool, J Zacarias-Cabeza, LTM Dao, ... Nature communications 6 (1), 6905, 2015	156	2015
Integrative analysis of public ChIP-seq experiments reveals a complex multi-cell regulatory landscape A Griffon, Q Barbier, J Dalino, J van Helden, S Spicuglia, B Ballester Nucleic acids research 43 (4), e27-e27, 2015	140	2015
Multi-species, multi-transcription factor binding highlights conserved control of tissue-specific biological pathways B Ballester, A Medina-Rivera, D Schmidt, M Gonzàlez-Porta, M Carlucci, ... Elife 3, e02626, 2014	120	2014

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