| A community‐derived classification for extant lycophytes and ferns PPG I Journal of systematics and evolution 54 (6), 563-603, 2016 | 1661 | 2016 |
| Fern genomes elucidate land plant evolution and cyanobacterial symbioses FW Li, P Brouwer, L Carretero-Paulet, S Cheng, J De Vries, PM Delaux, ... Nature plants 4 (7), 460-472, 2018 | 449 | 2018 |
| A revised family–level classification for eupolypod II ferns (Polypodiidae: Polypodiales) CJ Rothfels, MA Sundue, LY Kuo, A Larsson, M Kato, E Schuettpelz, ... Taxon 61 (3), 515-533, 2012 | 241 | 2012 |
| First insights into fern matK phylogeny LY Kuo, FW Li, WL Chiou, CN Wang Molecular Phylogenetics and Evolution 59 (3), 556-566, 2011 | 174 | 2011 |
| Overcoming deep roots, fast rates, and short internodes to resolve the ancient rapid radiation of eupolypod II ferns CJ Rothfels, A Larsson, LY Kuo, P Korall, WL Chiou, KM Pryer Systematic Biology 61 (3), 490, 2012 | 173 | 2012 |
| rbcL and matK Earn Two Thumbs Up as the Core DNA Barcode for Ferns FW Li, LY Kuo, CJ Rothfels, A Ebihara, WL Chiou, MD Windham, ... PloS one 6 (10), e26597, 2011 | 130 | 2011 |
| Conservation and divergence of small RNA pathways and microRNAs in land plants C You, J Cui, H Wang, X Qi, LY Kuo, H Ma, L Gao, B Mo, X Chen Genome biology 18, 1-19, 2017 | 112 | 2017 |
| A well-resolved fern nuclear phylogeny reveals the evolution history of numerous transcription factor families X Qi, LY Kuo, C Guo, H Li, Z Li, JI Qi, L Wang, YI Hu, J Xiang, C Zhang, ... Molecular Phylogenetics and Evolution 127, 961-977, 2018 | 109 | 2018 |
| Underwater CAM photosynthesis elucidated by Isoetes genome D Wickell, LY Kuo, HP Yang, A Dhabalia Ashok, I Irisarri, A Dadras, ... Nature Communications 12 (1), 6348, 2021 | 92 | 2021 |
| The flying spider-monkey tree fern genome provides insights into fern evolution and arborescence X Huang, W Wang, T Gong, D Wickell, LY Kuo, X Zhang, J Wen, H Kim, ... Nature Plants 8 (5), 500-512, 2022 | 83 | 2022 |
| Genes translocated into the plastid inverted repeat show decelerated substitution rates and elevated GC content FW Li, LY Kuo, KM Pryer, CJ Rothfels Genome biology and evolution 8 (8), 2452-2458, 2016 | 74 | 2016 |
| trnL-F is a powerful marker for DNA identification of field vittarioid gametophytes (Pteridaceae) CW Chen, YM Huang, LY Kuo, QD Nguyen, HT Luu, JR Callado, ... Annals of Botany 111 (4), 663-673, 2013 | 64 | 2013 |
| The separation of generations: biology and biogeography of long-lived sporophyteless fern gametophytes JB Pinson, SM Chambers, JH Nitta, LY Kuo, EB Sessa International Journal of Plant Sciences 178 (1), 1-18, 2017 | 59 | 2017 |
| Simultaneous diversification of Polypodiales and angiosperms in the Mesozoic XY Du, JM Lu, LB Zhang, J Wen, LY Kuo, CM Mynssen, H Schneider, ... Cladistics 37 (5), 518-539, 2021 | 54 | 2021 |
| Tissue‐direct PCR, a rapid and extraction‐free method for barcoding of ferns FW Li, LY Kuo, YM Huang, WL Chiou, CN Wang Molecular Ecology Resources 10 (1), 92-95, 2010 | 45 | 2010 |
| Historical biogeography of the fern genus Deparia (Athyriaceae) and its relation with polyploidy LY Kuo, A Ebihara, W Shinohara, G Rouhan, KR Wood, CN Wang, ... Molecular Phylogenetics and Evolution 104, 123-134, 2016 | 43 | 2016 |
| Order‐level fern plastome phylogenomics: new insights from Hymenophyllales LY Kuo, X Qi, H Ma, FW Li American Journal of Botany 105 (9), 1545-1555, 2018 | 40 | 2018 |
| A global phylogenomic study of the Thelypteridaceae S Fawcett, AR Smith, M Sundue, JG Burleigh, EB Sessa, LY Kuo, ... Systematic Botany 46 (4), 891-915, 2021 | 36 | 2021 |
| Organelle Genome Inheritance in Deparia Ferns (Athyriaceae, Aspleniineae, Polypodiales) LY Kuo, TY Tang, FW Li, HJ Su, WL Chiou, YM Huang, CN Wang Frontiers in Plant Science 9, 486, 2018 | 36 | 2018 |
| Not only in the temperate zone: independent gametophytes of two vittarioid ferns (Pteridaceae, Polypodiales) in East Asian subtropics LY Kuo, CW Chen, W Shinohara, A Ebihara, H Kudoh, H Sato, YM Huang, ... Journal of Plant Research 130, 255-262, 2017 | 26 | 2017 |
