| A multiplex serologic platform for diagnosis of tick-borne diseases R Tokarz, N Mishra, T Tagliafierro, S Sameroff, A Caciula, L Chauhan, ... Scientific reports 8 (1), 3158, 2018 | 89 | 2018 |
| Diagnosis of Zika virus infection by peptide array and enzyme-linked immunosorbent assay N Mishra, A Caciula, A Price, R Thakkar, J Ng, LV Chauhan, K Jain, ... MBio 9 (2), 10.1128/mbio. 00095-18, 2018 | 79 | 2018 |
| Antibodies to enteroviruses in cerebrospinal fluid of patients with acute flaccid myelitis N Mishra, TFF Ng, RL Marine, K Jain, J Ng, R Thakkar, A Caciula, A Price, ... MBio 10 (4), 10.1128/mbio. 01903-19, 2019 | 78 | 2019 |
| Immunoreactive peptide maps of SARS-CoV-2 N Mishra, X Huang, S Joshi, C Guo, J Ng, R Thakkar, Y Wu, X Dong, Q Li, ... Communications biology 4 (1), 225, 2021 | 56 | 2021 |
| An integer programming approach to novel transcript reconstruction from paired-end RNA-Seq reads S Mangul, A Caciula, S Al Seesi, D Brinza, AR Banday, R Kanadia Proceedings of the ACM Conference on Bioinformatics, Computational Biology …, 2012 | 24 | 2012 |
| Identification of immunoreactive linear epitopes of Borrelia miyamotoi R Tokarz, T Tagliafierro, A Caciula, N Mishra, R Thakkar, LV Chauhan, ... Ticks and tick-borne diseases 11 (1), 101314, 2020 | 23 | 2020 |
| Transcriptome assembly and quantification from Ion Torrent RNA-Seq data S Mangul, A Caciula, S Al Seesi, D Brinza, I Mӑndoiu, A Zelikovsky BMC genomics 15, 1-11, 2014 | 22 | 2014 |
| Influence of symbiont-produced bioactive natural products on holobiont fitness in the marine bryozoan, Bugula neritina via protein kinase C (PKC) M Mathew, KI Bean, Y Temate-Tiagueu, A Caciula, II Mandoiu, ... Marine biology 163, 1-17, 2016 | 21 | 2016 |
| DEvis: an R package for aggregation and visualization of differential expression data A Price, A Caciula, C Guo, B Lee, J Morrison, A Rasmussen, WI Lipkin, ... BMC bioinformatics 20, 1-7, 2019 | 18 | 2019 |
| Developing a multifunctional network laboratory for teaching and research X Cao, Y Wang, A Caciula, Y Wang Proceedings of the 10th ACM conference on SIG-information technology …, 2009 | 18 | 2009 |
| Spillover of ebolaviruses into people in eastern Democratic Republic of Congo prior to the 2018 Ebola virus disease outbreak T Goldstein, MN Belaganahalli, EK Syaluha, JPK Lukusa, DJ Greig, ... One Health Outlook 2, 1-10, 2020 | 17 | 2020 |
| Diagnosis of Zika virus infection by peptide array and enzyme-linked immunosorbent assay. mBio 9: e00095-18 N Mishra, A Caciula, A Price, R Thakkar, J Ng, LV Chauhan, K Jain, ... DOI 10, 00095-18, 2018 | 13 | 2018 |
| Improved transcriptome quantification and reconstruction from RNA-Seq reads using partial annotations S Mangul, A Caciula, O Glebova, I Mandoiu, A Zelikovsky In silico biology 11 (5-6), 251-261, 2012 | 8 | 2012 |
| Rna-seq based discovery and reconstruction of unannotated transcripts in partially annotated genomes S Mangul, A Caciula, I Mandoiu, A Zelikovsky 2011 IEEE International Conference on Bioinformatics and Biomedicine …, 2011 | 8 | 2011 |
| Immunoreactive peptide maps of SARS-CoV-2 and other human coronaviruses N Mishra, X Huang, S Joshi, C Guo, J Ng, R Thakkar, Y Wu, X Dong, Q Li, ... bioRxiv, 2020.08. 13.249953, 2020 | 6 | 2020 |
| Antibodies to enteroviruses in cerebrospinal fluid of patients with acute flaccid myelitis. mBio 10 N Mishra, TFF Ng, RL Marine, K Jain, J Ng, R Thakkar, A Caciula, A Price, ... | 5 | 2019 |
| Immunoreactive peptide maps of SARS-CoV-2. Commun Biol, 4 (1), 225 N Mishra, X Huang, S Joshi, C Guo, J Ng, R Thakkar, Y Wu, X Dong, Q Li, ... | 4 | 2021 |
| Transcriptome reconstruction and quantification from RNA sequencing Data S Al Seesi, S Mangul, A Caciula, A Zelikovsky, I Măndoiu Genome analysis: current procedures and applications, 39, 2014 | 3 | 2014 |
| Optimization techniques for next-generation sequencing data analysis A Caciula | 3 | 2014 |
| Identification of immunoreactive linear epitopes ofBorrelia miyamotoi R Tokarz, T Tagliafierro, A Caciula, N Mishra, R Thakkar, LV Chauhan, ... | 2 | 2019 |