Nathan Baker

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Prof. J. Andrew McCammonUniversity of California, San DiegoAdresă de e-mail confirmată pe ucsd.edu
Michael HolstProfessor of Mathematics and Physics, UC San DiegoAdresă de e-mail confirmată pe ucsd.edu
David SeptUniversity of MichiganAdresă de e-mail confirmată pe umich.edu
Jens Erik NielsenSenior Vice President, Enzyme, Protein and Strain Engineering Research, NovonesisAdresă de e-mail confirmată pe novozymes.com
Dennis G. ThomasPacific Northwest National LaboratoryAdresă de e-mail confirmată pe pnnl.gov
Simpson JosephProfessor of Chemistry & Biochemistry, UC San DiegoAdresă de e-mail confirmată pe ucsd.edu
Guo-Wei WeiMSU Foundation Professor, Mathematics, Biochemistry & Molecular Biology, Electrical & ComputerAdresă de e-mail confirmată pe msu.edu
Elizabeth JurrusBoeing, Defense, Space & SecurityAdresă de e-mail confirmată pe pnnl.gov
Paul SchlesingerAssociate Professor Washington UniversityAdresă de e-mail confirmată pe wustl.edu
Brett OlsenWashington University in St. LouisAdresă de e-mail confirmată pe go.wustl.edu
Huan LeiMichigan State UniversityAdresă de e-mail confirmată pe msu.edu
Yuhua SongThe University of Alabama at BirminghamAdresă de e-mail confirmată pe uab.edu
Jason WagonerJunior Laufer FellowAdresă de e-mail confirmată pe stonybrook.edu
David GoharaDirector of Research Computing, Saint Louis UniversityAdresă de e-mail confirmată pe slu.edu
Lisa FelbergGraduate Student, University of California, BerkeleyAdresă de e-mail confirmată pe berkeley.edu
Teresa Head-GordonUC BerkeleyAdresă de e-mail confirmată pe berkeley.edu
Keith StarPacific Northwest National LaboratoryAdresă de e-mail confirmată pe pnnl.gov
Chandrajit BajajComputational Applied Mathematics Chair, Professor of Computer Science,Adresă de e-mail confirmată pe cs.utexas.edu
Alexey OnufrievVirginia TechAdresă de e-mail confirmată pe vt.edu
Lois PollackProfessor of Applied and Engineering Physics, Cornell UniversityAdresă de e-mail confirmată pe cornell.edu

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Nathan Baker

Microsoft

Adresă de e-mail confirmată pe microsoft.com - Pagina de pornire

Applied mathematics biophysics informatics computational biology chemistry


Titlu Sortați după descrierea bibliografică Sortați după an Sortați după titlu	Citat de Citat de	Anul
Electrostatics of nanosystems: application to microtubules and the ribosome NA Baker, D Sept, S Joseph, MJ Holst, JA McCammon Proceedings of the National Academy of Sciences 98 (18), 10037-10041, 2001	8218	2001
PDB2PQR: an automated pipeline for the setup of Poisson–Boltzmann electrostatics calculations TJ Dolinsky, JE Nielsen, JA McCammon, NA Baker Nucleic acids research 32 (suppl_2), W665-W667, 2004	3814	2004
PDB2PQR: expanding and upgrading automated preparation of biomolecular structures for molecular simulations TJ Dolinsky, P Czodrowski, H Li, JE Nielsen, JH Jensen, G Klebe, ... Nucleic acids research 35 (suppl_2), W522-W525, 2007	2115	2007
Improvements to the APBS biomolecular solvation software suite E Jurrus, D Engel, K Star, K Monson, J Brandi, LE Felberg, DH Brookes, ... Protein science 27 (1), 112-128, 2018	1956	2018
Improving implicit solvent simulations: a Poisson-centric view NA Baker Current opinion in structural biology 15 (2), 137-143, 2005	453	2005
Adaptive multilevel finite element solution of the Poisson–Boltzmann equation I. Algorithms and examples M Holst, N Baker, F Wang Journal of computational chemistry 21 (15), 1319-1342, 2000	383	2000
Assessing implicit models for nonpolar mean solvation forces: the importance of dispersion and volume terms JA Wagoner, NA Baker Proceedings of the National Academy of Sciences 103 (22), 8331-8336, 2006	361	2006
Web servers and services for electrostatics calculations with APBS and PDB2PQR S Unni, Y Huang, RM Hanson, M Tobias, S Krishnan, WW Li, JE Nielsen, ... Journal of Computational Chemistry 32 (7), 1488-1491, 2011	296	2011
Progress in the prediction of pK_a values in proteins E Alexov, EL Mehler, N Baker, A M. Baptista, Y Huang, F Milletti, ... Proteins: structure, function, and bioinformatics 79 (12), 3260-3275, 2011	290	2011
Chemception: a deep neural network with minimal chemistry knowledge matches the performance of expert-developed QSAR/QSPR models GB Goh, C Siegel, A Vishnu, NO Hodas, N Baker arXiv preprint arXiv:1706.06689, 2017	280	2017
Poisson–Boltzmann methods for biomolecular electrostatics NA Baker Methods in enzymology 383, 94-118, 2004	273	2004
Adaptive multilevel finite element solution of the Poisson–Boltzmann equation II. Refinement at solvent‐accessible surfaces in biomolecular systems N Baker, M Holst, F Wang Journal of computational chemistry 21 (15), 1343-1352, 2000	264	2000
Biomolecular electrostatics and solvation: a computational perspective P Ren, J Chun, DG Thomas, MJ Schnieders, M Marucho, J Zhang, ... Quarterly reviews of biophysics 45 (4), 427-491, 2012	223	2012
The physical basis of microtubule structure and stability D Sept, NA Baker, JA McCammon Protein science 12 (10), 2257-2261, 2003	186	2003
Data-driven parameterization of the generalized Langevin equation H Lei, NA Baker, X Li Proceedings of the National Academy of Sciences 113 (50), 14183-14188, 2016	167	2016
Workshop report on basic research needs for scientific machine learning: Core technologies for artificial intelligence N Baker, F Alexander, T Bremer, A Hagberg, Y Kevrekidis, H Najm, ... USDOE Office of Science (SC), Washington, DC (United States), 2019	161	2019
The adaptive multilevel finite element solution of the Poisson-Boltzmann equation on massively parallel computers NA Baker, D Sept, MJ Holst, JA McCammon IBM Journal of Research and Development 45 (3.4), 427-438, 2001	160	2001
NanoParticle Ontology for cancer nanotechnology research DG Thomas, RV Pappu, NA Baker Journal of Biomedical Informatics 44 (1), 59-74, 2010	157	2010
Differential geometry based solvation model I: Eulerian formulation Z Chen, NA Baker, GW Wei Journal of computational physics 229 (22), 8231-8258, 2010	156	2010
A multiscale model linking ion-channel molecular dynamics and electrostatics to the cardiac action potential JR Silva, H Pan, D Wu, A Nekouzadeh, KF Decker, J Cui, NA Baker, ... Proceedings of the National Academy of Sciences 106 (27), 11102-11106, 2009	156	2009

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