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www. nature. com/scientificreports OPEN Comparative genomics of Mycobacterium africanum Lineage 5 and Lineage 6 from Ghana suggests Received: 23 November 2017
D Brites, C Loiseau, C Meehan, S Osei-Wusu, A Forson, C Laryea, ...
SCIENTIfIC RepoRtS 8, 11269, 2018
Mandate: Swiss National Science Foundation, Wellcome Trust, European Commission
Disponibile undeva: 63
A phylogenomic view of ecological specialization in the Lachnospiraceae, a family of digestive tract-associated bacteria
CJ Meehan, RG Beiko
Genome Biology and Evolution 6 (3), 703-713, 2014
Mandate: Canadian Institutes of Health Research
Microbial shifts in the aging mouse gut
MGI Langille, CJ Meehan, JE Koenig, AS Dhanani, RA Rose, SE Howlett, ...
Microbiome 2, 1-12, 2014
Mandate: Canadian Institutes of Health Research
Whole genome sequencing of Mycobacterium tuberculosis: current standards and open issues
CJ Meehan, GA Goig, TA Kohl, L Verboven, A Dippenaar, M Ezewudo, ...
NATURE reviews microbiology 17 (9), 533-545, 2019
Mandate: US National Institutes of Health, Research Foundation (Flanders), German …
Interactions in the microbiome: communities of organisms and communities of genes
E Boon*, CJ Meehan*, C Whidden, DHJ Wong, MGI Langille, RG Beiko, ...
FEMS microbiology reviews 38 (1), 90-118, 2014
Mandate: Canadian Institutes of Health Research
A sister lineage of the Mycobacterium tuberculosis complex discovered in the African Great Lakes region
JCS Ngabonziza, C Loiseau, M Marceau, A Jouet, F Menardo, O Tzfadia, ...
Nature communications 11 (1), 2917, 2020
Mandate: Swiss National Science Foundation, European Commission, Agence Nationale de …
Unexpected high prevalence of resistance-associated Rv0678 variants in MDR-TB patients without documented prior use of clofazimine or bedaquiline
C Villellas, N Coeck, CJ Meehan, N Lounis, B de Jong, L Rigouts, ...
Journal of Antimicrobial Chemotherapy 72 (3), 684-690, 2017
Mandate: Research Foundation (Flanders), European Commission
Modulation of Aneuploidy in Leishmania donovani during Adaptation to Different In Vitro and In Vivo Environments and Its Impact on Gene Expression
F Dumetz, H Imamura, M Sanders, V Seblova, J Myskova, P Pescher, ...
MBio 8 (3), 10.1128/mbio. 00599-17, 2017
Mandate: Research Foundation (Flanders), Wellcome Trust
Phylogenomics of Mycobacterium africanum reveals a new lineage and a complex evolutionary history
M Coscolla, S Gagneux, F Menardo, C Loiseau, P Ruiz-Rodriguez, ...
Microbial genomics 7 (2), 000477, 2021
Mandate: Swiss National Science Foundation, Wellcome Trust, European Commission …
GWAS for quantitative resistance phenotypes in Mycobacterium tuberculosis reveals resistance genes and regulatory regions
MR Farhat, L Freschi, R Calderon, T Ioerger, M Snyder, CJ Meehan, ...
Nature communications 10 (1), 2128, 2019
Mandate: US National Institutes of Health, Belgian Science Policy Office
Isoniazid resistance levels of Mycobacterium tuberculosis can largely be predicted by high-confidence resistance-conferring mutations
P Lempens, CJ Meehan, K Vandelannoote, K Fissette, P de Rijk, ...
Scientific reports 8 (1), 3246, 2018
Mandate: European Commission
The relationship between transmission time and clustering methods in Mycobacterium tuberculosis epidemiology
CJ Meehan, P Moris, TA Kohl, J Pečerska, S Akter, M Merker, C Utpatel, ...
EBioMedicine 37, 410-416, 2018
Mandate: Swiss National Science Foundation, Research Foundation (Flanders), Helmholtz …
The phylogenetic landscape and nosocomial spread of the multidrug-resistant opportunist Stenotrophomonas maltophilia
MI Gröschel, CJ Meehan, I Barilar, M Diricks, A Gonzaga, M Steglich, ...
Nature Communications 11 (1), 2044, 2020
Mandate: US National Institutes of Health, National Natural Science Foundation of …
Specific gyrA gene mutations predict poor treatment outcome in MDR-TB
L Rigouts, N Coeck, M Gumusboga, WB De Rijk, KJM Aung, MA Hossain, ...
Journal of Antimicrobial Chemotherapy 71 (2), 314-323, 2016
Mandate: European Commission
Reconstituting the genus Mycobacterium
CJ Meehan, RA Barco, YHE Loh, S Cogneau, L Rigouts
International journal of systematic and evolutionary microbiology 71 (9), 004922, 2021
Mandate: Belgian Science Policy Office
The evolution of the class A scavenger receptors
FJ Whelan, CJ Meehan, GB Golding, BJ McConkey, DM E Bowdish
BMC evolutionary biology 12, 1-11, 2012
Mandate: Canadian Institutes of Health Research
Prevalence and drivers of false-positive rifampicin-resistant Xpert MTB/RIF results: a prospective observational study in Rwanda
JCS Ngabonziza, T Decroo, P Migambi, YM Habimana, A Van Deun, ...
The Lancet Microbe 1 (2), e74-e83, 2020
Mandate: European Commission, European & Developing Countries Clinical Trials Partnership
A Genome-Based Species Taxonomy of the Lactobacillus Genus Complex
S Wittouck, S Wuyts, CJ Meehan, V van Noort, S Lebeer
MSystems 4 (5), 10.1128/msystems. 00264-19, 2019
Mandate: Research Foundation (Flanders)
Whole genome sequencing to complement tuberculosis drug resistance surveys in Uganda
W Ssengooba, CJ Meehan, D Lukoye, GW Kasule, K Musisi, ML Joloba, ...
Infection, Genetics and Evolution 40, 8-16, 2016
Mandate: European Commission
Nanopore sequencing for mycobacterium tuberculosis: a critical review of the literature, new developments, and future opportunities
A Dippenaar, SN Goossens, M Grobbelaar, S Oostvogels, B Cuypers, ...
Journal of clinical microbiology 60 (1), e00646-21, 2022
Mandate: Research Foundation (Flanders)
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