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Pathmanaban Ramasamy
Pathmanaban Ramasamy
VIB-UGent Center for Medical Biotechnology, Structural Biology Brussels-VUB
Adresă de e-mail confirmată pe ugent.be
Titlu
Citat de
Citat de
Anul
MobiDB: intrinsically disordered proteins in 2021
D Piovesan, M Necci, N Escobedo, AM Monzon, A Hatos, I Mičetić, ...
Nucleic acids research 49 (D1), D361-D367, 2021
2232021
PDBe-KB: collaboratively defining the biological context of structural data
Nucleic acids research 50 (D1), D534-D542, 2022
442022
Cov-MS: a community-based template assay for mass-spectrometry-based protein detection in SARS-CoV-2 patients
B Van Puyvelde, K Van Uytfanghe, O Tytgat, L Van Oudenhove, ...
Jacs Au 1 (6), 750-765, 2021
412021
More than the “Killer Trait”: Infection with the Bacterial Endosymbiont Caedibacter taeniospiralis Causes Transcriptomic Modulation in Paramecium Host
K Grosser, P Ramasamy, AD Amirabad, MH Schulz, G Gasparoni, ...
Genome biology and evolution 10 (2), 646-656, 2018
342018
Scop3P: a comprehensive resource of human phosphosites within their full context
P Ramasamy, D Turan, N Tichshenko, N Hulstaert, E Vandermarliere, ...
Journal of Proteome Research 19 (8), 3478-3486, 2020
322020
Reboot surgery for chronic rhinosinusitis with nasal polyposis: recurrence and smell kinetics
SC Gomes, C Cavaliere, S Masieri, T Van Zele, P Gevaert, G Holtappels, ...
European Archives of Oto-Rhino-Laryngology 279 (12), 5691-5699, 2022
272022
Challenges in describing the conformation and dynamics of proteins with ambiguous behavior
J Roca-Martinez, T Lazar, J Gavalda-Garcia, D Bickel, R Pancsa, B Dixit, ...
Frontiers in molecular biosciences 9, 959956, 2022
182022
Differential subcellular distribution of four phospholipase C isoforms and secretion of GPI-PLC activity.
Plattner H, Staudt E, Ramasamy P, Simon M
Biochimica et Biophysica Acta (BBA) - Biomembranes 1858 (12), 3157–3168, 2016
172016
b2bTools: online predictions for protein biophysical features and their conservation
LP Kagami, G Orlando, D Raimondi, F Ancien, B Dixit, J Gavaldá-García, ...
Nucleic acids research 49 (W1), W52-W59, 2021
142021
Transgenic expression of the RNA binding protein IMP2 stabilizes miRNA targets in murine microsteatosis
AD Amirabad, P Ramasamy, M Wierz, K Nordström, SM Kessler, ...
Biochimica et Biophysica Acta (BBA)-Molecular Basis of Disease 1864 (10 …, 2018
122018
Panoramic perspective on human phosphosites
P Ramasamy, E Vandermarliere, WF Vranken, L Martens
Journal of Proteome Research 21 (8), 1894-1915, 2022
82022
Massively parallel interrogation of protein fragment secretability using SECRiFY reveals features influencing secretory system transit
M Boone, P Ramasamy, J Zuallaert, R Bouwmeester, B Van Moer, ...
Nature Communications 12 (1), 6414, 2021
62021
Additional insights into the adaptation of cotton plants under abiotic stresses by in silico analysis of conserved miRNAs in cotton expressed sequence tag database (dbEST)
NM Boopathi, R Pathmanaban
African Journal of Biotechnology 11 (76), 14054-14063, 2012
52012
PhosphoLingo: Protein language models for phosphorylation site prediction
J Zuallaert, P Ramasamy, R Bouwmeester, N Callewaert, S Degroeve
Bioinformatics. https://doi. org/10.1101/2022.11 28, 2022
32022
Online biophysical predictions for SARS-CoV-2 proteins
L Kagami, J Roca-Martínez, J Gavaldá-García, P Ramasamy, KA Feenstra, ...
BMC Molecular and Cell Biology 22 (1), 23, 2021
12021
Massively parallel interrogation of protein fragment secretability using SECRiFY reveals features influencing secretory system transit (vol 12, 6414, 2021
M Boone, P Ramasamy, J Zuallaert, R Bouwmeester, B Van Moer, ...
NATURE COMMUNICATIONS 14 (1), 2023
2023
Author Correction: Massively parallel interrogation of protein fragment secretability using SECRiFY reveals features influencing secretory system transit
M Boone, P Ramasamy, J Zuallaert, R Bouwmeester, B Van Moer, ...
nature communications 14, 1072, 2023
2023
A study on experimental bias in post-translational modification predictors
J Zuallaert, P Ramasamy, R Bouwmeester, N Callewaert, S Degroeve
bioRxiv, 2022.11. 28.518163, 2022
2022
Uncovering new knowledge on protein post-translational modifications by large-scale reprocessing and analysis of public proteomics data
P Ramasamy
2022
Scop3P: the bridge between human phosphosites, protein structure and proteomics data
P Ramasamy
ASMS Conference on Mass Spectrometry and Allied Topics, 2020
2020
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