Lnc2Cancer: a manually curated database of experimentally supported lncRNAs associated with various human cancers S Ning, J Zhang, P Wang, H Zhi, J Wang, Y Liu, Y Gao, M Guo, M Yue, ... Nucleic acids research 44 (D1), D980-D985, 2016 | 347 | 2016 |
Lnc2Cancer 3.0: an updated resource for experimentally supported lncRNA/circRNA cancer associations and web tools based on RNA-seq and scRNA-seq data Y Gao, S Shang, S Guo, X Li, H Zhou, H Liu, Y Sun, J Wang, P Wang, ... Nucleic acids research 49 (D1), D1251-D1258, 2021 | 230 | 2021 |
Identification of lncRNA-associated competing triplets reveals global patterns and prognostic markers for cancer P Wang, S Ning, Y Zhang, R Li, J Ye, Z Zhao, H Zhi, T Wang, Z Guo, X Li Nucleic acids research 43 (7), 3478-3489, 2015 | 204 | 2015 |
Lnc2Cancer v2. 0: updated database of experimentally supported long non-coding RNAs in human cancers Y Gao, P Wang, Y Wang, X Ma, H Zhi, D Zhou, X Li, Y Fang, W Shen, Y Xu, ... Nucleic acids research 47 (D1), D1028-D1033, 2019 | 173 | 2019 |
miRSponge: a manually curated database for experimentally supported miRNA sponges and ceRNAs P Wang, H Zhi, Y Zhang, Y Liu, J Zhang, Y Gao, M Guo, S Ning, X Li Database 2015, bav098, 2015 | 122 | 2015 |
LncACTdb 2.0: an updated database of experimentally supported ceRNA interactions curated from low-and high-throughput experiments P Wang, X Li, Y Gao, Q Guo, Y Wang, Y Fang, X Ma, H Zhi, D Zhou, ... Nucleic acids research 47 (D1), D121-D127, 2019 | 105 | 2019 |
LincSNP 2.0: an updated database for linking disease-associated SNPs to human long non-coding RNAs and their TFBSs S Ning, M Yue, P Wang, Y Liu, H Zhi, Y Zhang, J Zhang, Y Gao, M Guo, ... Nucleic acids research, gkw945, 2016 | 69 | 2016 |
LncACTdb 3.0: an updated database of experimentally supported ceRNA interactions and personalized networks contributing to precision medicine P Wang, Q Guo, Y Qi, Y Hao, Y Gao, H Zhi, Y Zhang, Y Sun, Y Zhang, ... Nucleic acids research 50 (D1), D183-D189, 2022 | 68 | 2022 |
LincSNP: a database of linking disease-associated SNPs to human large intergenic non-coding RNAs S Ning, Z Zhao, J Ye, P Wang, H Zhi, R Li, T Wang, X Li BMC bioinformatics 15, 1-7, 2014 | 66 | 2014 |
LnCeVar: a comprehensive database of genomic variations that disturb ceRNA network regulation P Wang, X Li, Y Gao, Q Guo, S Ning, Y Zhang, S Shang, J Wang, Y Wang, ... Nucleic acids research 48 (D1), D111-D117, 2020 | 62 | 2020 |
MSDD: a manually curated database of experimentally supported associations among miRNAs, SNPs and human diseases M Yue, D Zhou, H Zhi, P Wang, Y Zhang, Y Gao, M Guo, X Li, Y Wang, ... Nucleic acids research 46 (D1), D181-D185, 2018 | 57 | 2018 |
LnCeCell: a comprehensive database of predicted lncRNA-associated ceRNA networks at single-cell resolution P Wang, Q Guo, Y Hao, Q Liu, Y Gao, H Zhi, X Li, S Shang, S Guo, ... Nucleic Acids Research 49 (D1), D125-D133, 2021 | 55 | 2021 |
A novel reannotation strategy for dissecting DNA methylation patterns of human long intergenic non-coding RNAs in cancers H Zhi, S Ning, X Li, Y Li, W Wu, X Li Nucleic acids research 42 (13), 8258-8270, 2014 | 48 | 2014 |
Lnc2Meth: a manually curated database of regulatory relationships between long non-coding RNAs and DNA methylation associated with human disease H Zhi, X Li, P Wang, Y Gao, B Gao, D Zhou, Y Zhang, M Guo, M Yue, ... Nucleic Acids Research 46 (D1), D133-D138, 2018 | 45 | 2018 |
Comprehensive characterization of somatic mutations impacting lncRNA expression for pan-cancer Y Gao, X Li, H Zhi, Y Zhang, P Wang, Y Wang, S Shang, Y Fang, W Shen, ... Molecular Therapy-Nucleic Acids 18, 66-79, 2019 | 31 | 2019 |
Inferences of individual drug responses across diverse cancer types using a novel competing endogenous RNA network Y Zhang, X Li, D Zhou, H Zhi, P Wang, Y Gao, M Guo, M Yue, Y Wang, ... Molecular Oncology 12 (9), 1429-1446, 2018 | 29 | 2018 |
Construction of a lncRNA-mediated feed-forward loop network reveals global topological features and prognostic motifs in human cancers S Ning, Y Gao, P Wang, X Li, H Zhi, Y Zhang, Y Liu, J Zhang, M Guo, ... Oncotarget 7 (29), 45937, 2016 | 23 | 2016 |
Improved method for prioritization of disease associated lncRNAs based on ceRNA theory and functional genomics data P Wang, Q Guo, Y Gao, H Zhi, Y Zhang, Y Liu, J Zhang, M Yue, M Guo, ... Oncotarget 8 (3), 4642, 2016 | 21 | 2016 |
SNP@ lincTFBS: an integrated database of polymorphisms in human LincRNA transcription factor binding sites S Ning, Z Zhao, J Ye, P Wang, H Zhi, R Li, T Wang, J Wang, L Wang, X Li PloS one 9 (7), e103851, 2014 | 21 | 2014 |
Epigenome signature as an immunophenotype indicator prompts durable clinical immunotherapy benefits in lung adenocarcinoma X Pan, C Zhang, J Wang, P Wang, Y Gao, S Shang, S Guo, X Li, H Zhi, ... Briefings in Bioinformatics 23 (1), bbab481, 2022 | 15 | 2022 |