MM/GBSA binding energy prediction on the PDBbind data set: successes, failures, and directions for further improvement PA Greenidge, C Kramer, JC Mozziconacci, RM Wolf Journal of chemical information and modeling 53 (1), 201-209, 2013 | 308 | 2013 |
Antimalarial activity: the search for marine-derived natural products with selective antimalarial activity AD Wright, GM König, CK Angerhofer, P Greenidge, A Linden, ... Journal of Natural Products 59 (7), 710-716, 1996 | 214 | 1996 |
Evaluation of machine-learning methods for ligand-based virtual screening B Chen, RF Harrison, G Papadatos, P Willett, DJ Wood, XQ Lewell, ... Journal of computer-aided molecular design 21, 53-62, 2007 | 162 | 2007 |
Pseudoreceptor modeling: The construction of three-dimensional receptor surrogates A Vedani, P Zbinden, JP Snyder, PA Greenidge Journal of the American Chemical Society 117 (17), 4987-4994, 1995 | 125 | 1995 |
Improving docking results via reranking of ensembles of ligand poses in multiple X-ray protein conformations with MM-GBSA PA Greenidge, C Kramer, JC Mozziconacci, W Sherman Journal of chemical information and modeling 54 (10), 2697-2717, 2014 | 92 | 2014 |
Pharmacophores incorporating numerous excluded volumes defined by X-ray crystallographic structure in three-dimensional database searching: application to the thyroid hormone … PA Greenidge, B Carlsson, LG Bladh, M Gillner Journal of medicinal chemistry 41 (14), 2503-2512, 1998 | 87 | 1998 |
Discovery of novel indolinone-based, potent, selective and brain penetrant inhibitors of LRRK2 T Troxler, P Greenidge, K Zimmermann, S Desrayaud, P Drückes, ... Bioorganic & medicinal chemistry letters 23 (14), 4085-4090, 2013 | 50 | 2013 |
Functional probing of the human glucocorticoid receptor steroid-interacting surface by site-directed mutagenesis: Gln-642 plays an important role in steroid recognition and binding U Lind, P Greenidge, M Gillner, KF Koehler, A Wright, J Carlstedt-Duke Journal of Biological Chemistry 275 (25), 19041-19049, 2000 | 45 | 2000 |
Structure–activity relationships of cannabinoids: A joint CoMFA and pseudoreceptor modelling study S Schmetzer, P Greenidge, KA Kovar, M Schulze-Alexandru, G Folkers Journal of computer-aided molecular design 11 (3), 278-292, 1997 | 34 | 1997 |
DNA minor groove recognition properties of pentamidine and its analogs: a molecular modeling study. PA Greenidge, TC Jenkins, S Neidle Molecular pharmacology 43 (6), 982-988, 1993 | 34 | 1993 |
Generation of ligand conformations in continuum solvent consistent with protein active site topology: Application to thrombin PA Greenidge, SAM Mérette, R Beck, G Dodson, CA Goodwin, MF Scully, ... Journal of medicinal chemistry 46 (8), 1293-1305, 2003 | 29 | 2003 |
A Comparison of Methods for Pharmacophore Generation with the Catalyst Software and their Use for 3D-QSAR Application to a Set of 4-Aminopyridine Thrombin Inhibitors PA Greenidge, J Weiser Mini reviews in medicinal chemistry 1 (1), 79-87, 2001 | 25 | 2001 |
Valine 571 functions as a regional organizer in programming the glucocorticoid receptor for differential binding of glucocorticoids and mineralocorticoids U Lind, P Greenidge, JÅ Gustafsson, APH Wright, J Carlstedt-Duke Journal of Biological Chemistry 274 (26), 18515-18523, 1999 | 24 | 1999 |
Introducing the consensus modeling concept in genetic algorithms: application to interpretable discriminant analysis M Ganguly, N Brown, A Schuffenhauer, P Ertl, VJ Gillet, PA Greenidge Journal of chemical information and modeling 46 (5), 2110-2124, 2006 | 22 | 2006 |
Boosting Pose Ranking Performance via Rescoring with MM‐GBSA PA Greenidge, RA Lewis, P Ertl Chemical Biology & Drug Design 88 (3), 317-328, 2016 | 14 | 2016 |
Formats for organic compounds for use in RNA interference JL Baryza, M Blommers, W Chutkow, C Fernandez, E Geno, A Gossert, ... US Patent 9,988,627, 2018 | 8 | 2018 |
The use of multiple excluded volumes derived from X-ray crystallographic structures in 3D database searching and 3D QSAR M Gillner, P Greenidge Pharmacophore Perception, Development and Use in Drug Design, 372-384, 2000 | 8 | 2000 |
How to Computationally Stack the Deck for Hit-to-Lead Generation: In Silico Molecular Interaction Energy Profiling for de Novo siRNA Guide Strand Surrogate … PA Greenidge, MJJ Blommers, JP Priestle, J Hunziker Journal of chemical information and modeling 59 (5), 1897-1908, 2019 | 7 | 2019 |
Factors involved in guanine/cytosine (G/C) selectivity of DNA-binding drugs: a molecular modelling study of ligand interactions with a tyr T DNA sequence PA Greenidge, CA Laughton, TC Jenkins, S Neidle Journal of the Chemical Society, Faraday Transactions 89 (15), 2651-2657, 1993 | 7 | 1993 |
Organic compounds to treat hepatitis B virus JL Baryza, M Blommers, C Fernandez, E Geno, A Gossert, P Greenidge, ... US Patent 10,519,446, 2019 | 5 | 2019 |