| Comparison of human cell signaling pathway databases—evolution, drawbacks and challenges S Chowdhury, RR Sarkar Database 2015, bau126, 2015 | 136 | 2015 |
| Survival improvement for patients with metastatic colorectal cancer over twenty years FA Zeineddine, MA Zeineddine, A Yousef, Y Gu, S Chowdhury, A Dasari, ... NPJ Precision Oncology 7 (1), 16, 2023 | 81 | 2023 |
| Comprehensive Clinical and Molecular Characterization of KRASG12C-Mutant Colorectal Cancer JT Henry, O Coker, S Chowdhury, JP Shen, VK Morris, A Dasari, ... JCO Precision Oncology 5, 613-621, 2021 | 73 | 2021 |
| Impact of KRAS mutations and co-mutations on clinical outcomes in pancreatic ductal adenocarcinoma A Yousef, M Yousef, S Chowdhury, K Abdilleh, M Knafl, P Edelkamp, ... NPJ Precision Oncology 8 (1), 27, 2024 | 37 | 2024 |
| Structural and Logical Analysis of a Comprehensive Hedgehog Signaling Pathway to Identify Alternative Drug Targets for Glioma, Colon and Pancreatic Cancer S Chowdhury, RN Pradhan, RR Sarkar PLOS ONE 8 (7), e69132, 2013 | 28 | 2013 |
| Implications of Intratumor Heterogeneity on Consensus Molecular Subtype (CMS) in Colorectal Cancer S Chowdhury, M Hofree, K Lin, D Maru, S Kopetz, JP Shen Cancers 13 (19), 4923, 2021 | 26 | 2021 |
| Defining the KRAS-and ERK-dependent transcriptome in KRAS-mutant cancers JA Klomp, JE Klomp, CA Stalnecker, KL Bryant, AC Edwards, ... Science 384 (6700), eadk0775, 2024 | 25 | 2024 |
| Oncogene addiction to GNAS in GNASR201 mutant tumors A More, I Ito, V Haridas, S Chowdhury, Y Gu, P Dickson, N Fowlkes, ... Oncogene 41 (35), 4159-4168, 2022 | 17 | 2022 |
| Identification of Th1/Th2 regulatory switch to promote healing response during leishmaniasis: a computational approach P Ganguli, S Chowdhury, S Chowdhury, RR Sarkar Eurasip Journal on Bioinformatics and Systems Biology 2015, 1-19, 2015 | 17 | 2015 |
| Serum Tumor Markers and Outcomes in Patients With Appendiceal Adenocarcinoma A Yousef, M Yousef, MA Zeineddine, A More, M Fanaeian, S Chowdhury, ... JAMA Network Open 7 (2), e240260-e240260, 2024 | 11 | 2024 |
| Molecular basis of drug resistance in smoothened receptor: An in silico study of protein resistivity and specificity N Sinha, S Chowdhury, RR Sarkar Proteins: Structure, Function, and Bioinformatics 88 (3), 514-526, 2020 | 9 | 2020 |
| Drug targets and biomarker identification from computational study of human notch signaling pathway S Chowdhury, R Sarkar Clin. Exp. Pharmacol 3 (137), 2161-1459.1000137, 2013 | 9 | 2013 |
| Deciphering structural stability and binding mechanisms of potential antagonists with smoothened protein N Sinha, S Chowdhury, RR Sarkar Journal of Biomolecular Structure and Dynamics 36 (11), 2917-2937, 2018 | 8 | 2018 |
| exploring Notch pathway to elucidate phenotypic plasticity and Intra-tumor Heterogeneity in Gliomas S Chowdhury, RR Sarkar Scientific reports 9 (1), 9488, 2019 | 7 | 2019 |
| Identification of colorectal cancer cell stemness from single-cell RNA sequencing K Lin, S Chowdhury, MA Zeineddine, FA Zeineddine, NJ Hornstein, ... Molecular Cancer Research 22 (4), 337-346, 2024 | 6 | 2024 |
| Intraperitoneal paclitaxel is a safe and effective therapeutic strategy for treating mucinous appendiceal adenocarcinoma I Ito, AMG Yousef, S Chowdhury, PN Dickson, ZA Naini, MG White, ... Cancer Research 83 (19), 3184-3191, 2023 | 5 | 2023 |
| Transcriptional Profiling and Consensus Molecular Subtype Assignment to Understand Response and Resistance to Anti–Epidermal Growth Factor Receptor Therapy in Colorectal Cancer S Chowdhury, R Gupta, J Millstein, K Lin, V Haridas, MA Zeineddine, ... JCO Precision Oncology 7, e2200422, 2023 | 5 | 2023 |
| Temporal protein expression pattern in intracellular signalling cascade during T-cell activation: A computational study P Ganguli, S Chowdhury, R Bhowmick, RR Sarkar Journal of biosciences 40, 769-789, 2015 | 5 | 2015 |
| Peritoneal Microenvironment Promotes Appendiceal Adenocarcinoma Growth: A Multi-omics Approach Using Patient-Derived Xenografts VK Pattalachinti, I Ito, S Chowdhury, A Yousef, Y Gu, BB Gunes, ER Salle, ... Molecular Cancer Research 22 (4), 329-336, 2024 | 3 | 2024 |
| BIOPYDB: a dynamic human cell specific biochemical pathway database with advanced computational analyses platform S Chowdhury, N Sinha, P Ganguli, R Bhowmick, V Singh, S Nandi, ... Journal of Integrative Bioinformatics 15 (3), 20170072, 2018 | 3 | 2018 |
