| A simple guide to de novo transcriptome assembly and annotation V Raghavan, L Kraft, F Mesny, L Rigerte Briefings in bioinformatics 23 (2), bbab563, 2022 | 117 | 2022 |
| Benchmarking software tools for trimming adapters and merging next-generation sequencing data for ancient DNA A Lien, LP Legori, L Kraft, PW Sackett, G Renaud Frontiers in Bioinformatics 3, 1260486, 2023 | 5 | 2023 |
| SAFARI: Pangenome Alignment of Ancient DNA Using Purine/Pyrimidine Encodings J Rubin, J van Waaij, L Kraft, J Sirén, PW Sackett, G Renaud bioRxiv, 2024 | | 2024 |
| CarpeDeam: A De Novo Metagenome Assembler for Heavily Damaged Ancient Datasets L Kraft, J Söding, M Steinegger, A Jochheim, PW Sackett, ... bioRxiv, 2024.08. 09.607291, 2024 | | 2024 |
