| Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020 E Alm, EK Broberg, T Connor, EB Hodcroft, AB Komissarov, ... Eurosurveillance 25 (32), 2001410, 2020 | 269 | 2020 |
| Phylogenetic background and habitat drive the genetic diversification of Escherichia coli M Touchon, A Perrin, JAM de Sousa, B Vangchhia, S Burn, CL O’Brien, ... PLOS Genetics 16 (6), e1008866, 2020 | 199 | 2020 |
| PPanGGOLiN: Depicting microbial diversity via a partitioned pangenome graph G Gautreau, A Bazin, M Gachet, R Planel, L Burlot, M Dubois, A Perrin, ... PLOS Computational Biology 16 (3), e1007732, 2020 | 195 | 2020 |
| Evolutionary dynamics and genomic features of the Elizabethkingia anophelis 2015 to 2016 Wisconsin outbreak strain A Perrin, E Larsonneur, AC Nicholson, DJ Edwards, KM Gundlach, ... Nature communications 8, 15483, 2017 | 171 | 2017 |
| IntegronFinder 2.0: identification and analysis of integrons across Bacteria, with a focus on antibiotic resistance in Klebsiella B Néron, E Littner, M Haudiquet, A Perrin, J Cury, EPC Rocha Microorganisms 10 (4), 700, 2022 | 156 | 2022 |
| Achieving dietary recommendations and reducing greenhouse gas emissions: modelling diets to minimise the change from current intakes GW Horgan, A Perrin, S Whybrow, JI Macdiarmid International Journal of Behavioral Nutrition and Physical Activity 13, 1-11, 2016 | 150 | 2016 |
| PanACoTA: A modular tool for massive microbial comparative genomics A Perrin, EPC Rocha NAR Genomics and Bioinformatics 3 (1), lqaa106, 2021 | 95 | 2021 |
| Evolutionary dynamics and genomic features of the Elizabethkingia anophelis 2015 to 2016 Wisconsin outbreak strain. Nat Commun. 2017; 8: 15483 A Perrin, E Larsonneur, AC Nicholson, DJ Edwards, KM Gundlach, ... Epub 2017/05/26. https://doi. org/10.1038/ncomms15483 PMID: 28537263, 0 | 27 | |
| Interoperable medical data: The missing link for understanding COVID‐19 DC Bauer, A Metke‐Jimenez, S Maurer‐Stroh, S Tiruvayipati, LOW Wilson, ... Transboundary and emerging diseases 68 (4), 1753-1760, 2021 | 26 | 2021 |
| ProCARs: Progressive reconstruction of ancestral gene orders A Perrin, JS Varré, S Blanquart, A Ouangraoua BMC genomics 16, 1-11, 2015 | 23 | 2015 |
| Assisted transcriptome reconstruction and splicing orthology S Blanquart, JS Varré, P Guertin, A Perrin, A Bergeron, KM Swenson BMC genomics 17, 157-164, 2016 | 19 | 2016 |
| Was the last bacterial common ancestor a monoderm after all? RR Léonard, E Sauvage, V Lupo, A Perrin, D Sirjacobs, P Charlier, F Kerff, ... Genes 13 (2), 376, 2022 | 13 | 2022 |
| Spread of carbapenemase-producing Morganella spp from 2013 to 2021: a comparative genomic study RA Bonnin, E Creton, A Perrin, D Girlich, C Emeraud, AB Jousset, ... The Lancet Microbe, 2024 | 6 | 2024 |
| Correction: PPanGGOLiN: Depicting microbial diversity via a partitioned pangenome graph G Gautreau, A Bazin, M Gachet, R Planel, L Burlot, M Dubois, A Perrin, ... PLOS Computational Biology 17 (12), e1009687, 2021 | 4 | 2021 |
| BioConvert: a comprehensive format converter for life sciences H Caro, S Dollin, A Biton, B Brancotte, D Desvillechabrol, Y Dufresne, B Li, ... NAR Genomics and Bioinformatics 5 (3), lqad074, 2023 | 2 | 2023 |
| Comparative genomics of carbapenemase-producing Morganella spp RA Bonnin, E Creton, A Perrin, D Girlich, C Emeraud, AB Jousset, ... bioRxiv, 2023.03. 30.534920, 2023 | 1 | 2023 |
| Integron_Finder B Néron, J Cury, E Rocha, A Perrin Institut Pasteur Paris; CNRS, 2024 | | 2024 |
| Tools for massive bacterial comparative genomics: Development and Applications A Perrin Sorbonne université, 2022 | | 2022 |
| Tools for massive bacterial comparative genomics: Development and Applications.(Outils pour la génomique comparative des bactéries à large échelle: développement et applications). A Perrin Sorbone University, France, 2022 | | 2022 |
| Bioconvert: a collaborative bioinformatics format converter library T Cokelaer, A Biton, B Brancotte, Y Dufresne, KH Hillion, E Kornobis, ... F1000Research 7, 2018 | | 2018 |
Eduardo RochaCNRS, Institut PasteurOverená e-mailová adresa na: pasteur.fr
