On the dielectric “constant” of proteins: smooth dielectric function for macromolecular modeling and its implementation in DelPhi L Li, C Li, Z Zhang, E Alexov Journal of chemical theory and computation 9 (4), 2126-2136, 2013 | 601 | 2013 |
DelPhi: a comprehensive suite for DelPhi software and associated resources L Li, C Li, S Sarkar, J Zhang, S Witham, Z Zhang, L Wang, N Smith, ... BMC biophysics 5, 1-11, 2012 | 385 | 2012 |
DelPhi web server v2: incorporating atomic-style geometrical figures into the computational protocol N Smith, S Witham, S Sarkar, J Zhang, L Li, C Li, E Alexov Bioinformatics 28 (12), 1655-1657, 2012 | 61 | 2012 |
DelPhi: a comprehensive suite for DelPhi software and associated resources. BMC Biophys 5: 9. doi: 10.1186 L Li, C Li, S Sarkar, J Zhang, S Witham, Z Zhang, L Wang, N Smith, ... PubMed, 2012 | 58 | 2012 |
Highly efficient and exact method for parallelization of grid‐based algorithms and its implementation in DelPhi C Li, L Li, J Zhang, E Alexov Journal of computational chemistry 33 (24), 1960-1966, 2012 | 56 | 2012 |
DelPhi suite: new developments and review of functionalities C Li, Z Jia, A Chakravorty, S Pahari, Y Peng, S Basu, M Koirala, ... Journal of computational chemistry 40 (28), 2502-2508, 2019 | 55 | 2019 |
On the modeling of polar component of solvation energy using smooth Gaussian-based dielectric function L Li, C Li, E Alexov Journal of Theoretical and Computational Chemistry 13 (03), 1440002, 2014 | 52 | 2014 |
Progress in developing Poisson-Boltzmann equation solvers C Li, L Li, M Petukh, E Alexov Computational and Mathematical Biophysics 1 (2013), 42-62, 2013 | 48 | 2013 |
Predicting nonspecific ion binding using DelPhi M Petukh, M Zhenirovskyy, C Li, L Li, L Wang, E Alexov Biophysical journal 102 (12), 2885-2893, 2012 | 38 | 2012 |
Continuous development of schemes for parallel computing of the electrostatics in biological systems: Implementation in DelPhi C Li, M Petukh, L Li, E Alexov Journal of computational chemistry 34 (22), 1949-1960, 2013 | 29 | 2013 |
A spatially second order alternating direction implicit (ADI) method for solving three dimensional parabolic interface problems Z Wei, C Li, S Zhao Computers & Mathematics with Applications 75 (6), 2173-2192, 2018 | 20 | 2018 |
Alternating direction ghost-fluid methods for solving the heat equation with interfaces C Li, Z Wei, G Long, C Campbell, S Ashlyn, S Zhao Computers & Mathematics with Applications 80 (5), 714-732, 2020 | 17 | 2020 |
On the electrostatic properties of homodimeric proteins B Campbell, M Petukh, E Alexov, C Li Journal of Theoretical and Computational Chemistry 13 (03), 1440007, 2014 | 17 | 2014 |
A matched Peaceman–Rachford ADI method for solving parabolic interface problems C Li, S Zhao Applied Mathematics and Computation 299, 28-44, 2017 | 16 | 2017 |
Structured mathematical models to investigate the interactions between Plasmodium falciparum malaria parasites and host immune response B Ma, C Li, J Warner Mathematical biosciences 310, 65-75, 2019 | 14 | 2019 |
Modeling electrostatics in molecular biology: A tutorial of DelPhi and associated resources [Article v1. 0] SK Panday, MHB Shashikala, M Koirala, S Pahari, A Chakvorty, Y Peng, ... Living Journal of Computational Molecular Science 1 (2), 10841-10841, 2019 | 10 | 2019 |
A fast Sine transform accelerated high-order finite difference method for parabolic problems over irregular domains C Li, Y Ren, G Long, E Boerman, S Zhao Journal of Scientific Computing 95 (2), 49, 2023 | 7 | 2023 |
Alternating direction implicit (ADI) methods for solving two-dimensional parabolic interface problems with variable coefficients C Li, G Long, Y Li, S Zhao Computation 9 (7), 79, 2021 | 5 | 2021 |
Protein Nano-Object Integrator (ProNOI) for generating atomic style objects for molecular modeling N Smith, B Campbell, L Li, C Li, E Alexov BMC structural biology 12, 1-10, 2012 | 5 | 2012 |
Time stepping for the cable equation, Part 1: Serial performance C Li, V Alexiades Proceedings of Neural, Parallel & Scientific Computations 4, 241-246, 2010 | 4 | 2010 |