| 3D chromatin architecture of large plant genomes determined by local A/B compartments P Dong, X Tu, PY Chu, P Lü, N Zhu, D Grierson, B Du, P Li, S Zhong Molecular plant 10 (12), 1497-1509, 2017 | 294 | 2017 |
| Genetics of the human microglia regulome refines Alzheimer’s disease risk loci R Kosoy, JF Fullard, B Zeng, J Bendl, P Dong, S Rahman, SP Kleopoulos, ... Nature genetics 54 (8), 1145-1154, 2022 | 112 | 2022 |
| The sequencing bias relaxed characteristics of Hi-C derived data and implications for chromatin 3D modeling C Peng, LY Fu, PF Dong, ZL Deng, JX Li, XT Wang, HY Zhang Nucleic acids research 41 (19), e183-e183, 2013 | 70 | 2013 |
| Tissue‐specific Hi‐C analyses of rice, foxtail millet and maize suggest non‐canonical function of plant chromatin domains P Dong, X Tu, H Li, J Zhang, D Grierson, P Li, S Zhong Journal of Integrative Plant Biology 62 (2), 201-217, 2020 | 65 | 2020 |
| A multi-omic Nicotiana benthamiana resource for fundamental research and biotechnology B Ranawaka, J An, MT Lorenc, H Jung, M Sulli, G Aprea, S Roden, ... Nature Plants 9 (9), 1558-1571, 2023 | 55 | 2023 |
| Chromatin domain alterations linked to 3D genome organization in a large cohort of schizophrenia and bipolar disorder brains K Girdhar, GE Hoffman, J Bendl, S Rahman, P Dong, W Liao, ... Nature neuroscience 25 (4), 474-483, 2022 | 51 | 2022 |
| The three-dimensional landscape of cortical chromatin accessibility in Alzheimer’s disease J Bendl, ME Hauberg, K Girdhar, E Im, JM Vicari, S Rahman, ... Nature neuroscience 25 (10), 1366-1378, 2022 | 47 | 2022 |
| Plant and animal chromatin three-dimensional organization: similar structures but different functions P Dong, X Tu, Z Liang, BH Kang, S Zhong Journal of Experimental Botany 71 (17), 5119-5128, 2020 | 40 | 2020 |
| Population-level variation in enhancer expression identifies disease mechanisms in the human brain P Dong, GE Hoffman, P Apontes, J Bendl, S Rahman, MB Fernando, ... Nature Genetics 54 (10), 1493-1503, 2022 | 36* | 2022 |
| Structural heterogeneity and functional diversity of topologically associating domains in mammalian genomes XT Wang, PF Dong, HY Zhang, C Peng Nucleic acids research 43 (15), 7237-7246, 2015 | 28 | 2015 |
| Genome-wide analysis of a model-derived binge eating disorder phenotype identifies risk loci and implicates iron metabolism D Burstein, TC Griffen, K Therrien, J Bendl, S Venkatesh, P Dong, ... Nature Genetics 55 (9), 1462-1470, 2023 | 25* | 2023 |
| Chromatin and regulatory differentiation between bundle sheath and mesophyll cells in maize X Dai, X Tu, B Du, P Dong, S Sun, X Wang, J Sun, G Li, T Lu, S Zhong, ... The Plant Journal 109 (3), 675-692, 2022 | 24 | 2022 |
| Low temperature-induced regulatory network rewiring via WRKY regulators during banana peel browning W Zhu, H Li, P Dong, X Ni, M Fan, Y Yang, S Xu, Y Xu, Y Qian, Z Chen, ... Plant Physiology 193 (1), 855-873, 2023 | 19 | 2023 |
| Lineage specific 3D genome structure in the adult human brain and neurodevelopmental changes in the chromatin interactome S Rahman, P Dong, P Apontes, MB Fernando, R Kosoy, KG Townsley, ... Nucleic Acids Research 51 (20), 11142-11161, 2023 | 15* | 2023 |
| ATP selection in a random peptide library consisting of prebiotic amino acids SK Kang, BX Chen, T Tian, XS Jia, XY Chu, R Liu, PF Dong, QY Yang, ... Biochemical and Biophysical Research Communications 466 (3), 400-405, 2015 | 15 | 2015 |
| The neuroepigenome: implications of chemical and physical modifications of genomic DNA in schizophrenia K Girdhar, S Rahman, P Dong, JF Fullard, P Roussos Biological psychiatry 92 (6), 443-449, 2022 | 11 | 2022 |
| Convergence of the dysregulated regulome in schizophrenia with polygenic risk and evolutionarily constrained enhancers P Dong, G Voloudakis, JF Fullard, GE Hoffman, P Roussos Molecular psychiatry 29 (3), 782-792, 2024 | 5 | 2024 |
| The neuronal chromatin landscape in adult schizophrenia brains is linked to early fetal development K Girdhar, J Bendl, A Baumgartner, K Therrien, S Venkatesh, D Mathur, ... Research Square, rs. 3. rs-3393581, 2023 | 5 | 2023 |
| Transcriptome and chromatin accessibility landscapes across 25 distinct human brain regions expand the susceptibility gene set for neuropsychiatric disorders P Dong, J Bendl, R Misir, Z Shao, J Edelstien, DA Davis, V Haroutunian, ... BioRxiv, 2022.09. 02.506419, 2022 | 3 | 2022 |
| Characterization of plant 3D chromatin architecture, in situ Hi-C library preparation, and data analysis P Dong, S Zhong Plant Epigenetics and Epigenomics: Methods and Protocols, 147-157, 2020 | 2 | 2020 |
