| A mechanistic model and therapeutic interventions for COVID-19 involving a RAS-mediated bradykinin storm MR Garvin, C Alvarez, JI Miller, ET Prates, AM Walker, BK Amos, AE Mast, ... elife 9, e59177, 2020 | 452 | 2020 |
| SARS-CoV-2 suppresses anticoagulant and fibrinolytic gene expression in the lung AE Mast, AS Wolberg, D Gailani, MR Garvin, C Alvarez, JI Miller, ... Elife 10, e64330, 2021 | 63 | 2021 |
| Oil hydrocarbon degradation by Caspian Sea microbial communities JI Miller, S Techtmann, J Fortney, N Mahmoudi, D Joyner, J Liu, S Olesen, ... Frontiers in microbiology 10, 995, 2019 | 43 | 2019 |
| Microbial communities across global marine basins show important compositional similarities by depth JI Miller, S Techtmann, D Joyner, N Mahmoudi, J Fortney, JA Fordyce, ... MBio 11 (4), 10.1128/mbio. 01448-20, 2020 | 23 | 2020 |
| Sustained ability of a natural microbial community to remove nitrate from groundwater CJ Paradis, JI Miller, JW Moon, SJ Spencer, LM Lui, JD Van Nostrand, ... Groundwater 60 (1), 99-111, 2022 | 10 | 2022 |
| Genetics of varicose veins reveals polygenic architecture and genetic overlap with arterial and venous disease MG Levin, JE Huffman, A Verma, KA Sullivan, AA Rodriguez, D Kainer, ... Nature Cardiovascular Research 2 (1), 44-57, 2023 | 5 | 2023 |
| Exploring the role of plant lysin motif receptor-like kinases in regulating plant-microbe interactions in the bioenergy crop Populus KR Cope, ET Prates, JI Miller, ONA Demerdash, M Shah, D Kainer, A Cliff, ... Computational and Structural Biotechnology Journal 21, 1122-1139, 2023 | 4 | 2023 |
| dkainer/RWRtoolkit D Kainer, M Lane, K Sullivan, M Cashman, JI Miller Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States), 2022 | 4 | 2022 |
| Digging deeper into GWAS signal using GRIN implicates additional genes contributing to suicidal behavior KA Sullivan, M Lane, M Cashman, JI Miller, M Pavicic, AM Walker, A Cliff, ... medRxiv, 2022.04. 20.22273895, 2022 | 4 | 2022 |
| RWRtoolkit: multi-omic network analysis using random walks on multiplex networks in any species D Kainer, M Lane, KA Sullivan, JI Miller, M Cashman, M Morgan, A Cliff, ... bioRxiv, 2024.07. 17.603975, 2024 | 3 | 2024 |
| MENTOR: multiplex embedding of networks for team-based omics research KA Sullivan, JI Miller, A Townsend, M Morgan, M Lane, M Pavicic, M Shah, ... bioRxiv, 2024 | 2 | 2024 |
| Multi-omic network analysis identifies dysregulated neurobiological pathways in opioid addiction KA Sullivan, D Kainer, M Lane, M Cashman, JI Miller, MR Garvin, ... Biological Psychiatry, 2024 | 1 | 2024 |
| Analyses of GWAS signal using GRIN identify additional genes contributing to suicidal behavior KA Sullivan, M Lane, M Cashman, JI Miller, M Pavicic, AM Walker, A Cliff, ... Communications Biology 7 (1), 1360, 2024 | 1 | 2024 |
| Comparing the response of the indigenous microbial community to crude oil amendment in oxic versus hypoxic conditions ZG Griffiths, AD Putt, JI Miller, MF Campa, DC Joyner, O Pelz, ... Frontiers in Microbiomes 2, 1270352, 2023 | 1 | 2023 |
| RWRtoolkit-a set of command-line and R tools for performing Random-walk with Restart analyses on multiplex networks in any species D Kainer, M Lane, KA Sullivan, M Cashman, JI Miller Oak Ridge National Laboratory, 2022 | 1 | 2022 |
| Response to comment on ‘SARS-CoV-2 suppresses anticoagulant and fibrinolytic gene expression in the lung’ AE Mast, AS Wolberg, D Gailani, MR Garvin, C Alvarez, JI Miller, P Jones, ... Elife 11, e74951, 2022 | 1 | 2022 |
| Potential for oil hydrocarbon biodegradation by microbial communities in marine environments J Miller University of Tennessee, 2019 | 1 | 2019 |
| Identifying Biological Pathways Underlying Switchgrass Bioenergy Traits Using Arabidopsis thaliana Exascale/Petascale Complexity Networks Deployed in KBase K Sullivan, MJ Lane, D Kainer, DD Blair, HB Chhetri, YQ Wang, M Morgan, ... Plant and Animal Genome Conference/PAG 31 (January 12-17, 2024), 2024 | | 2024 |
| 78. NETWORK BIOLOGY ALGORITHMS IDENTIFY BIOLOGICAL PATHWAYS UNDERLYING CIGARETTE SMOKING BEHAVIORS K Sullivan, JI Miller, D Kainer, M Lane, M Cashman, MR Garvin, ... European Neuropsychopharmacology 75, S98-S99, 2023 | | 2023 |
| Antiviral Strategies Against SARS-CoV-2: A Systems Biology Approach ET Prates, MR Garvin, P Jones, JI Miller, KA Sullivan, A Cliff, ... SARS-CoV-2: Methods and Protocols, 317-351, 2022 | | 2022 |
