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| A tissue-specific atlas of mouse protein phosphorylation and expression EL Huttlin, MP Jedrychowski, JE Elias, T Goswami, R Rad, SA Beausoleil, ... Cell 143 (7), 1174-1189, 2010 | 1887 | 2010 |
| MultiNotch MS3 enables accurate, sensitive, and multiplexed detection of differential expression across cancer cell line proteomes GC McAlister, DP Nusinow, MP Jedrychowski, M Wühr, EL Huttlin, ... Analytical chemistry 86 (14), 7150-7158, 2014 | 1307 | 2014 |
| MS3 eliminates ratio distortion in isobaric multiplexed quantitative proteomics L Ting, R Rad, SP Gygi, W Haas Nature methods 8 (11), 937-940, 2011 | 1143 | 2011 |
| Comparative evaluation of mass spectrometry platforms used in large-scale proteomics investigations JE Elias, W Haas, BK Faherty, SP Gygi Nature methods 2 (9), 667-675, 2005 | 862 | 2005 |
| Transcriptional control of autophagy–lysosome function drives pancreatic cancer metabolism RM Perera, S Stoykova, BN Nicolay, KN Ross, J Fitamant, M Boukhali, ... Nature 524 (7565), 361-365, 2015 | 828 | 2015 |
| Increasing the multiplexing capacity of TMTs using reporter ion isotopologues with isobaric masses GC McAlister, EL Huttlin, W Haas, L Ting, MP Jedrychowski, JC Rogers, ... Analytical chemistry 84 (17), 7469-7478, 2012 | 684 | 2012 |
| Regulation of monoubiquitinated PCNA by DUB autocleavage TT Huang, SMB Nijman, KD Mirchandani, PJ Galardy, MA Cohn, W Haas, ... Nature cell biology 8 (4), 341-347, 2006 | 670 | 2006 |
| A comprehensive Xist interactome reveals cohesin repulsion and an RNA-directed chromosome conformation A Minajigi, JE Froberg, C Wei, H Sunwoo, B Kesner, D Colognori, ... Science 349 (6245), aab2276, 2015 | 521 | 2015 |
| Stromal microenvironment shapes the intratumoral architecture of pancreatic cancer M Ligorio, S Sil, J Malagon-Lopez, LT Nieman, S Misale, M Di Pilato, ... Cell 178 (1), 160-175. e27, 2019 | 499 | 2019 |
| Pharmacological perturbation of CDK9 using selective CDK9 inhibition or degradation CM Olson, B Jiang, MA Erb, Y Liang, ZM Doctor, Z Zhang, T Zhang, ... Nature chemical biology 14 (2), 163-170, 2018 | 495 | 2018 |
| HER2 expression identifies dynamic functional states within circulating breast cancer cells NV Jordan, A Bardia, BS Wittner, C Benes, M Ligorio, Y Zheng, M Yu, ... Nature 537 (7618), 102-106, 2016 | 425 | 2016 |
| Succinate dehydrogenase is a direct target of sirtuin 3 deacetylase activity LWS Finley, W Haas, V Desquiret-Dumas, DC Wallace, V Procaccio, ... PloS one 6 (8), e23295, 2011 | 421 | 2011 |
| A UAF1-containing multisubunit protein complex regulates the Fanconi anemia pathway MA Cohn, P Kowal, K Yang, W Haas, TT Huang, SP Gygi, AD D'Andrea Molecular cell 28 (5), 786-797, 2007 | 399 | 2007 |
| Large-Scale Phosphorylation Analysis of α-Factor-Arrested Saccharomyces cerevisiae X Li, SA Gerber, AD Rudner, SA Beausoleil, W Haas, J Villen, JE Elias, ... Journal of proteome research 6 (3), 1190-1197, 2007 | 381 | 2007 |
| Optimization and Use of Peptide Mass Measurement Accuracy in Shotgun Proteomics* S W Haas, BK Faherty, SA Gerber, JE Elias, SA Beausoleil, CE Bakalarski, ... Molecular & Cellular Proteomics 5 (7), 1326-1337, 2006 | 333 | 2006 |
| LKB1 loss links serine metabolism to DNA methylation and tumorigenesis F Kottakis, BN Nicolay, A Roumane, R Karnik, H Gu, JM Nagle, ... Nature 539 (7629), 390-395, 2016 | 325 | 2016 |
| A large-scale method to measure absolute protein phosphorylation stoichiometries R Wu, W Haas, N Dephoure, EL Huttlin, B Zhai, ME Sowa, SP Gygi Nature methods 8 (8), 677-683, 2011 | 318 | 2011 |
| Deregulation of ribosomal protein expression and translation promotes breast cancer metastasis RY Ebright, S Lee, BS Wittner, KL Niederhoffer, BT Nicholson, A Bardia, ... Science 367 (6485), 1468-1473, 2020 | 316 | 2020 |
| RNAi-dependent and-independent RNA turnover mechanisms contribute to heterochromatic gene silencing M Bühler, W Haas, SP Gygi, D Moazed Cell 129 (4), 707-721, 2007 | 286 | 2007 |
