| Molecular dynamics simulations of DNA–DNA and DNA–protein interactions J Yoo, D Winogradoff, A Aksimentiev Current Opinion in Structural Biology 64, 88-96, 2020 | 78 | 2020 |
| The acetylation landscape of the H4 histone tail: disentangling the interplay between the specific and cumulative effects D Winogradoff, I Echeverria, DA Potoyan, GA Papoian Journal of the American Chemical Society 137 (19), 6245-6253, 2015 | 77 | 2015 |
| Molecular mechanism of spontaneous nucleosome unraveling D Winogradoff, A Aksimentiev Journal of molecular biology 431 (2), 323-335, 2019 | 71 | 2019 |
| Chiral systems made from DNA D Winogradoff, PY Li, H Joshi, L Quednau, C Maffeo, A Aksimentiev Advanced Science 8 (5), 2003113, 2021 | 57 | 2021 |
| Protein unfolding by SDS: the microscopic mechanisms and the properties of the SDS-protein assembly D Winogradoff, S John, A Aksimentiev Nanoscale 12 (9), 5422-5434, 2020 | 55 | 2020 |
| Shearing of the CENP-A dimerization interface mediates plasticity in the octameric centromeric nucleosome D Winogradoff, H Zhao, Y Dalal, GA Papoian Scientific reports 5 (1), 17038, 2015 | 37 | 2015 |
| Promiscuous histone mis-assembly is actively prevented by chaperones H Zhao, D Winogradoff, M Bui, Y Dalal, GA Papoian Journal of the American Chemical Society 138 (40), 13207-13218, 2016 | 34 | 2016 |
| Benchmarking molecular dynamics force fields for all-atom simulations of biological condensates K Sarthak, D Winogradoff, Y Ge, S Myong, A Aksimentiev Journal of chemical theory and computation 19 (12), 3721-3740, 2023 | 29 | 2023 |
| Percolation transition prescribes protein size-specific barrier to passive transport through the nuclear pore complex D Winogradoff, HY Chou, C Maffeo, A Aksimentiev Nature communications 13 (1), 5138, 2022 | 28 | 2022 |
| The oligomerization landscape of histones H Zhao, D Winogradoff, Y Dalal, GA Papoian Biophysical journal 116 (10), 1845-1855, 2019 | 19 | 2019 |
| The structure and physical properties of a packaged bacteriophage particle K Coshic, C Maffeo, D Winogradoff, A Aksimentiev Nature 627 (8005), 905-914, 2024 | 13 | 2024 |
| All-Atom Structure and Ionic Conductivity of the Nuclear Pore Complex D Winogradoff, C Maffeo, W Si, A Aksimentiev Biophysical Journal 114 (3), 630a, 2018 | 1 | 2018 |
| The Molecular Mechanism of Nucleosome Breathing D Winogradoff, A Aksimentiev Biophysical Journal 112 (3), 371a, 2017 | 1 | 2017 |
| Molecular dynamic simulations of nucleosomes and histone tails: The effects of histone variance and post-translational modification DN Winogradoff University of Maryland, College Park, 2015 | 1 | 2015 |
| Effect of ATP on Phase Separation in FUS Condensates N Weaver, D Winogradoff, K Sarthak, A Aksimentiev APS March Meeting Abstracts 2022, T06. 004, 2022 | | 2022 |
| Benchmarking molecular dynamics force fields for simulations of biological condensates K Sarthak, DN Winogradoff, A Aksimentiev Biophysical Journal 121 (3), 197a, 2022 | | 2022 |
| Complete all-atom structure of a mature virion K Coshic, C Maffeo, DN Winogradoff, A Aksimentiev Biophysical Journal 121 (3), 67a, 2022 | | 2022 |
| Percolation transition determines protein size limit for passive transport through the nuclear pore complex D Winogradoff, HY Chou, C Maffeo, A Aksimentiev bioRxiv, 2021.12. 17.473237, 2021 | | 2021 |
| Unraveling the Nucleosome through Microscopic Simulations DN Winogradoff, A Aksimentiev Biophysical Journal 118 (3), 9a, 2020 | | 2020 |
| Multi-Resolution Model of the Eukaryotic Cytoplasm HY Chou, DN Winogradoff, CM Maffeo, A Aksimentiev Biophysical Journal 118 (3), 300a, 2020 | | 2020 |
Aleksei AksimentievUniversity of Illinois at Urbana-ChampaignPreverjeni e-poštni naslov na illinois.edu
