Spremljaj
Richard P. Bonocora
Naslov
Navedeno
Navedeno
Leto
Comprehensive Mapping of the Escherichia coli Flagellar Regulatory Network
DM Fitzgerald, RP Bonocora, JT Wade
PLoS genetics 10 (10), e1004649, 2014
2222014
Widespread suppression of intragenic transcription initiation by H-NS
SS Singh, N Singh, RP Bonocora, DM Fitzgerald, JT Wade, DC Grainger
Genes & development 28 (3), 214-219, 2014
1752014
Homing endonucleases: from genetic anomalies to programmable genomic clippers
M Belfort, RP Bonocora
Homing Endonucleases: Methods and Protocols, 1-26, 2014
1042014
Horizontally acquired AT-rich genes in Escherichia coli cause toxicity by sequestering RNA polymerase
LE Lamberte, G Baniulyte, SS Singh, AM Stringer, RP Bonocora, M Stracy, ...
Nature microbiology 2 (3), nmicrobiol2016249, 2017
962017
Genome-wide transcriptional response to varying RpoS levels in Escherichia coli K-12
GT Wong, RP Bonocora, AN Schep, SM Beeler, AJ Lee Fong, LM Shull, ...
Journal of bacteriology 199 (7), 10.1128/jb. 00755-16, 2017
932017
The restriction fold turns to the dark side: a bacterial homing endonuclease with a PD‐(D/E)‐XK motif
L Zhao, RP Bonocora, DA Shub, BL Stoddard
The EMBO journal 26 (9), 2432-2442, 2007
862007
The BvgAS Regulon of Bordetella pertussis
K Moon, RP Bonocora, DD Kim, Q Chen, JT Wade, S Stibitz, DM Hinton
MBio 8 (5), 10.1128/mbio. 01526-17, 2017
80*2017
Genome-scale analyses of Escherichia coli and Salmonella enterica AraC reveal noncanonical targets and an expanded core regulon
AM Stringer, S Currenti, RP Bonocora, C Baranowski, BL Petrone, ...
Journal of bacteriology 196 (3), 660-671, 2014
712014
Genome-Scale Mapping of Escherichia coli σ54 Reveals Widespread, Conserved Intragenic Binding
RP Bonocora, C Smith, P Lapierre, JT Wade
PLoS genetics 11 (10), e1005552, 2015
662015
A free-standing homing endonuclease targets an intron insertion site in the psbA gene of cyanophages
Q Zeng, RP Bonocora, DA Shub
Current biology 19 (3), 218-222, 2009
562009
A likely pathway for formation of mobile group I introns
RP Bonocora, DA Shub
Current Biology 19 (3), 223-228, 2009
542009
A novel group I intron‐encoded endonuclease specific for the anticodon region of tRNAfMet genes
RP Bonocora, DA Shub
Molecular microbiology 39 (5), 1299-1306, 2001
512001
Chemical Inhibition of Kynureninase Reduces Pseudomonas aeruginosa Quorum Sensing and Virulence Factor Expression
SH Kasper, RP Bonocora, JT Wade, RA Musah, NC Cady
ACS chemical biology 11 (4), 1106-1117, 2016
402016
Non-canonical protein-DNA interactions identified by ChIP are not artifacts
RP Bonocora, DM Fitzgerald, AM Stringer, JT Wade
BMC genomics 14, 1-10, 2013
292013
A basic/hydrophobic cleft of the T4 activator MotA interacts with the C‐terminus of E. coli σ70 to activate middle gene transcription
RP Bonocora, G Caignan, C Woodrell, MH Werner, DM Hinton
Molecular microbiology 69 (2), 331-343, 2008
272008
A self-splicing group I intron in DNA polymerase genes of T7-like bacteriophages
RP Bonocora, DA Shub
Journal of bacteriology 186 (23), 8153-8155, 2004
212004
ChIP-seq for genome-scale analysis of bacterial DNA-binding proteins
RP Bonocora, JT Wade
Bacterial Transcriptional Control: Methods and Protocols, 327-340, 2015
202015
A homing endonuclease and the 50-nt ribosomal bypass sequence of phage T4 constitute a mobile DNA cassette
RP Bonocora, Q Zeng, EV Abel, DA Shub
Proceedings of the National Academy of Sciences 108 (39), 16351-16356, 2011
202011
Bacteriophage T4 MotA activator and the β-flap tip of RNA polymerase target the same set of σ70 carboxyl-terminal residues
RP Bonocora, PK Decker, S Glass, L Knipling, DM Hinton
Journal of Biological Chemistry 286 (45), 39290-39296, 2011
112011
Bacteriophage lytic enzymes as antimicrobials
CJ Stark, RP Bonocora, JT Hoopes, DC Nelson
Bacteriophages in the Control of Food‐and Waterborne Pathogens, 137-156, 2010
92010
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