Thomas Zichner

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Soavtorji

Jan KorbelHead of Data Science, EMBL & Bridging Research Division Head, DKFZ, HeidelbergPreverjeni e-poštni naslov na embl.de
Tobias RauschEuropean Molecular Biology LaboratoryPreverjeni e-poštni naslov na embl.de
Marc StreitProfessor for Visual Data Science @ Johannes Kepler University LinzPreverjeni e-poštni naslov na jku.at
Holger Stitzdatavisyn GmbH, AustriaPreverjeni e-poštni naslov na datavisyn.io
Eileen E FurlongGroup Leader, Head of Dept.: European Molecular Biology LaboratoryPreverjeni e-poštni naslov na embl.de
David GarfieldGenentechPreverjeni e-poštni naslov na gene.com
Enrico CannavoGenentechPreverjeni e-poštni naslov na gene.com
Wolfgang HuberEMBL - European Molecular Biology LaboratoryPreverjeni e-poštni naslov na embl.org
Raeka AiyarStanford Genome Technology Center, Stanford UniversityPreverjeni e-poštni naslov na stanford.edu
Julien GagneurProfessor, TUM, MunichPreverjeni e-poštni naslov na in.tum.de
Gregoire PauGenentech, Université de RennesPreverjeni e-poštni naslov na gene.com
Paul Theodor PylDepartment of Laboratory Medicine, National Bioinformatics Infrastructure Sweden, Science for LifePreverjeni e-poštni naslov na scilifelab.se
Nicolas DelhommeResearcher, UPSC, Swedish University of Agricultural SciencesPreverjeni e-poštni naslov na slu.se
Falk HüffnerTomTomPreverjeni e-poštni naslov na tomtom.com
Sebastian BöckerProfessor für Bioinformatik, FSU JenaPreverjeni e-poštni naslov na uni-jena.de
Franziska HufskyRNA Bioinformatics and High Throughput Analysis, Friedrich Schiller University JenaPreverjeni e-poštni naslov na uni-jena.de
Pierre KhoueiryBoehringer-IngelheimPreverjeni e-poštni naslov na boehringer-ingelheim.com
Katarína FurmanováMasaryk UniversityPreverjeni e-poštni naslov na mail.muni.cz
Alexander LexAssociate Professor, SCI Institute, Kahlert School of Computing, University of UtahPreverjeni e-poštni naslov na sci.utah.edu
Sebastian M. WaszakAssistant Professor, Laboratory of Computational Neuro-Oncology, EPFLPreverjeni e-poštni naslov na epfl.ch

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Thomas Zichner

Distinguished Scientist, Boehringer Ingelheim RCV, Austria

Preverjeni e-poštni naslov na embl.de

Computational biology Structural variation Next-generation sequencing


Naslov Razvrsti po navedbah Razvrsti po letniku Razvrsti po naslovu	Navedeno Navedeno	Leto
An integrated map of structural variation in 2,504 human genomes PH Sudmant, T Rausch, EJ Gardner, RE Handsaker, A Abyzov, ... Nature 526 (7571), 75-81, 2015	2571	2015
DELLY: structural variant discovery by integrated paired-end and split-read analysis T Rausch, T Zichner, A Schlattl, AM Stütz, V Benes, JO Korbel Bioinformatics 28 (18), i333-i339, 2012	2275	2012
The whole-genome landscape of medulloblastoma subtypes PA Northcott, I Buchhalter, AS Morrissy, V Hovestadt, J Weischenfeldt, ... Nature 547 (7663), 311-317, 2017	1091	2017
Subgroup-specific structural variation across 1,000 medulloblastoma genomes PA Northcott, DJH Shih, J Peacock, L Garzia, A Sorana Morrissy, ... Nature 488 (7409), 49-56, 2012	1017	2012
Dissecting the genomic complexity underlying medulloblastoma DTW Jones, N Jäger, M Kool, T Zichner, B Hutter, M Sultan, YJ Cho, ... Nature 488 (7409), 100-105, 2012	980	2012
Genome Sequencing of Pediatric Medulloblastoma Links Catastrophic DNA Rearrangements with TP53 Mutations T Rausch, DTW Jones, M Zapatka, AM Stütz, T Zichner, J Weischenfeldt, ... Cell 148 (1), 59-71, 2012	978	2012
Recurrent somatic alterations of FGFR1 and NTRK2 in pilocytic astrocytoma DTW Jones, B Hutter, N Jäger, A Korshunov, M Kool, HJ Warnatz, ... Nature genetics 45 (8), 927-932, 2013	854	2013
Enhancer hijacking activates GFI1 family oncogenes in medulloblastoma PA Northcott, C Lee, T Zichner, AM Stütz, S Erkek, D Kawauchi, DJH Shih, ... Nature 511 (7510), 428-434, 2014	742	2014
Natural variation in genome architecture among 205 Drosophila melanogaster Genetic Reference Panel lines W Huang, A Massouras, Y Inoue, J Peiffer, M Ràmia, AM Tarone, ... Genome research 24 (7), 1193-1208, 2014	680	2014
Epigenomic alterations define lethal CIMP-positive ependymomas of infancy SC Mack, H Witt, RM Piro, L Gu, S Zuyderduyn, AM Stütz, X Wang, ... Nature 506 (7489), 445-450, 2014	668	2014
The genomic and transcriptomic landscape of a HeLa cell line JJM Landry, PT Pyl, T Rausch, T Zichner, MM Tekkedil, AM Stütz, A Jauch, ... G3: Genes, Genomes, Genetics 3 (8), 1213-1224, 2013	643	2013
Spectrum and prevalence of genetic predisposition in medulloblastoma: a retrospective genetic study and prospective validation in a clinical trial cohort SM Waszak, PA Northcott, I Buchhalter, GW Robinson, C Sutter, ... The Lancet Oncology 19 (6), 785-798, 2018	441	2018
Pan-cancer analysis of somatic copy-number alterations implicates IRS4 and IGF2 in enhancer hijacking J Weischenfeldt, T Dubash, AP Drainas, BR Mardin, Y Chen, AM Stütz, ... Nature genetics 49 (1), 65-74, 2017	419	2017
Integrative genomic analyses reveal an androgen-driven somatic alteration landscape in early-onset prostate cancer J Weischenfeldt, R Simon, L Feuerbach, K Schlangen, D Weichenhan, ... Cancer cell 23 (2), 159-170, 2013	404	2013
Genomics and drug profiling of fatal TCF3-HLF−positive acute lymphoblastic leukemia identifies recurrent mutation patterns and therapeutic options U Fischer, M Forster, A Rinaldi, T Risch, S Sungalee, HJ Warnatz, ... Nature genetics 47 (9), 1020-1029, 2015	278	2015
Shadow enhancers are pervasive features of developmental regulatory networks E Cannavò, P Khoueiry, DA Garfield, P Geeleher, T Zichner, ... Current Biology 26 (1), 38-51, 2016	277	2016
Recurrent MET fusion genes represent a drug target in pediatric glioblastoma Nature medicine 22 (11), 1314-1320, 2016	192	2016
Identifying the unknowns by aligning fragmentation trees F Rasche, K Scheubert, F Hufsky, T Zichner, M Kai, A Svatoš, S Böcker Analytical chemistry 84 (7), 3417-3426, 2012	136	2012
Algorithm engineering for color-coding with applications to signaling pathway detection F Hüffner, S Wernicke, T Zichner Algorithmica 52, 114-132, 2008	100	2008
Impact of genomic structural variation in Drosophila melanogaster based on population-scale sequencing T Zichner, DA Garfield, T Rausch, AM Stütz, E Cannavó, M Braun, ... Genome research 23 (3), 568-579, 2013	94	2013

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