Spremljaj
Raga Krishnakumar
Raga Krishnakumar
Preverjeni e-poštni naslov na sandia.gov
Naslov
Navedeno
Navedeno
Leto
The PARP side of the nucleus: molecular actions, physiological outcomes, and clinical targets
R Krishnakumar, WL Kraus
Molecular cell 39 (1), 8-24, 2010
10192010
Reciprocal binding of PARP-1 and histone H1 at promoters specifies transcriptional outcomes
R Krishnakumar, MJ Gamble, KM Frizzell, JG Berrocal, M Kininis, ...
Science 319 (5864), 819-821, 2008
4882008
PARP-1 regulates chromatin structure and transcription through a KDM5B-dependent pathway
R Krishnakumar, WL Kraus
Molecular cell 39 (5), 736-749, 2010
3642010
Enzymes in the NAD+ salvage pathway regulate SIRT1 activity at target gene promoters
T Zhang, JG Berrocal, KM Frizzell, MJ Gamble, ME DuMond, ...
Journal of Biological Chemistry 284 (30), 20408-20417, 2009
2932009
Gene editing and CRISPR in the clinic: current and future perspectives
MP Hirakawa, R Krishnakumar, JA Timlin, JP Carney, KS Butler
Bioscience reports 40 (4), BSR20200127, 2020
2162020
Extraction and biomolecular analysis of dermal interstitial fluid collected with hollow microneedles
PR Miller, RM Taylor, BQ Tran, G Boyd, T Glaros, VH Chavez, ...
Communications biology 1 (1), 173, 2018
2132018
The histone variant macroH2A1 marks repressed autosomal chromatin, but protects a subset of its target genes from silencing
MJ Gamble, KM Frizzell, C Yang, R Krishnakumar, WL Kraus
Genes & development 24 (1), 21-32, 2010
2122010
Global Analysis of Transcriptional Regulation by Poly (ADP-ribose) Polymerase-1 and Poly (ADP-ribose) Glycohydrolase in MCF-7 Human Breast Cancer Cells*♦
KM Frizzell, MJ Gamble, JG Berrocal, T Zhang, R Krishnakumar, Y Cen, ...
Journal of biological chemistry 284 (49), 33926-33938, 2009
1532009
Regulation of poly (ADP-ribose) polymerase-1-dependent gene expression through promoter-directed recruitment of a nuclear NAD+ synthase
T Zhang, JG Berrocal, J Yao, ME DuMond, R Krishnakumar, DD Ruhl, ...
Journal of Biological Chemistry 287 (15), 12405-12416, 2012
1182012
Two miRNA clusters reveal alternative paths in late-stage reprogramming
RJ Parchem, J Ye, RL Judson, MF LaRussa, R Krishnakumar, A Blelloch, ...
Cell stem cell 14 (5), 617-631, 2014
1012014
Systematic and stochastic influences on the performance of the MinION nanopore sequencer across a range of nucleotide bias
R Krishnakumar, A Sinha, SW Bird, H Jayamohan, HS Edwards, ...
Scientific reports 8 (1), 3159, 2018
882018
Real-time selective sequencing with RUBRIC: read until with basecall and reference-informed criteria
HS Edwards, R Krishnakumar, A Sinha, SW Bird, KD Patel, MS Bartsch
Scientific reports 9 (1), 11475, 2019
752019
Epigenetics of cellular reprogramming
R Krishnakumar, RH Blelloch
Current opinion in genetics & development 23 (5), 548-555, 2013
672013
Dynamic reorganization of the AC16 cardiomyocyte transcriptome in response to TNFα signaling revealed by integrated genomic analyses
X Luo, M Chae, R Krishnakumar, CG Danko, WL Kraus
BMC genomics 15, 1-22, 2014
462014
New candidates for regulated gene integrity revealed through precise mapping of integrative genetic elements
CM Mageeney, BY Lau, JM Wagner, CM Hudson, JS Schoeniger, ...
Nucleic acids research 48 (8), 4052-4065, 2020
302020
Expression of alternative Ago2 isoform associated with loss of microRNA-driven translational repression in mouse oocytes
JW Freimer, R Krishnakumar, MS Cook, R Blelloch
Current Biology 28 (2), 296-302. e3, 2018
292018
Tunable intervalence charge transfer in ruthenium prussian blue analog enables stable and efficient biocompatible artificial synapses
DA Robinson, ME Foster, CH Bennett, A Bhandarkar, ER Webster, ...
Advanced Materials 35 (37), 2207595, 2023
92023
OperonSEQer: A set of machine-learning algorithms with threshold voting for detection of operon pairs using short-read RNA-sequencing data
R Krishnakumar, AM Ruffing
PLoS computational biology 18 (1), e1009731, 2022
82022
Upregulation of CD14 in mesenchymal stromal cells accelerates lipopolysaccharide-induced response and enhances antibacterial properties
MP Hirakawa, N Tjahjono, YK Light, AN Celebi, NN Celebi, ...
Iscience 25 (2), 2022
72022
High-Density Guide RNA Tiling and Machine Learning for Designing CRISPR Interference in Synechococcus sp. PCC 7002
T Dallo, R Krishnakumar, SD Kolker, AM Ruffing
ACS Synthetic Biology 12 (4), 1175-1186, 2023
52023
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