A frequent, GxxxG-mediated, transmembrane association motif is optimized for the formation of interhelical Cα–H hydrogen bonds BK Mueller, S Subramaniam, A Senes Proceedings of the National Academy of Sciences 111 (10), E888-E895, 2014 | 133 | 2014 |
BH 3‐in‐groove dimerization initiates and helix 9 dimerization expands Bax pore assembly in membranes Z Zhang, S Subramaniam, J Kale, C Liao, B Huang, H Brahmbhatt, ... The EMBO journal 35 (2), 208-236, 2016 | 108 | 2016 |
Structural organization of FtsB, a transmembrane protein of the bacterial divisome LM LaPointe, KC Taylor, S Subramaniam, A Khadria, I Rayment, A Senes Biochemistry 52 (15), 2574-2585, 2013 | 43 | 2013 |
Structural informatics, modeling, and design with an open‐source Molecular Software Library (MSL) DW Kulp, S Subramaniam, JE Donald, BT Hannigan, BK Mueller, ... Journal of computational chemistry 33 (20), 1645-1661, 2012 | 36 | 2012 |
An energy‐based conformer library for side chain optimization: improved prediction and adjustable sampling S Subramaniam, A Senes Proteins: Structure, Function, and Bioinformatics 80 (9), 2218-2234, 2012 | 17 | 2012 |
Backbone dependency further improves side chain prediction efficiency in the E nergy‐based C onformer L ibrary (b EBL) S Subramaniam, A Senes Proteins: Structure, Function, and Bioinformatics 82 (11), 3177-3187, 2014 | 13 | 2014 |
Conformational sampling in protein structure prediction S Subramaniam The University of Wisconsin-Madison, 2014 | 3 | 2014 |
BH3-in-groove dimer interface that initiates mitochondrial Bax oligomerization rearranges to form a pore complex with an additional helix 9 dimer interface. J Lin, Z Zhang, S Subramaniam, J Kale, A Senes, DW Andrews MOLECULAR BIOLOGY OF THE CELL 25, 2014 | | 2014 |
High-throughtput ab initio prediction of transmembrane interactions A Senes, B Mueller, S Subramaniam PROTEIN SCIENCE 21, 187-188, 2012 | | 2012 |
A machine learning based approach to improve sidechain optimization S Subramaniam, S Natarajan, A Senes Proceedings of the 2nd ACM Conference on Bioinformatics, Computational …, 2011 | | 2011 |