| Evidence for several waves of global transmission in the seventh cholera pandemic A Mutreja, DW Kim, NR Thomson, TR Connor, JH Lee, S Kariuki, ... Nature 477 (7365), 462-465, 2011 | 841 | 2011 |
| Genomic history of the seventh pandemic of cholera in Africa FX Weill, D Domman, E Njamkepo, C Tarr, J Rauzier, N Fawal, KH Keddy, ... Science 358 (6364), 785-789, 2017 | 324 | 2017 |
| Whole genome sequencing reveals potential spread of Clostridium difficile between humans and farm animals in the Netherlands, 2002 to 2011 CW Knetsch, TR Connor, A Mutreja, SM Van Dorp, IM Sanders, ... Eurosurveillance 19 (45), 20954, 2014 | 254 | 2014 |
| Atlas of group A streptococcal vaccine candidates compiled using large-scale comparative genomics MR Davies, L McIntyre, A Mutreja, JA Lacey, JA Lees, RJ Towers, ... Nature genetics 51 (6), 1035-1043, 2019 | 191 | 2019 |
| Integrated view of Vibrio cholerae in the Americas D Domman, ML Quilici, MJ Dorman, E Njamkepo, A Mutreja, AE Mather, ... Science 358 (6364), 789-793, 2017 | 160 | 2017 |
| Genomic plasticity associated with antimicrobial resistance in Vibrio cholerae J Verma, S Bag, B Saha, P Kumar, TS Ghosh, M Dayal, T Senapati, ... Proceedings of the National Academy of Sciences 116 (13), 6226-6231, 2019 | 123 | 2019 |
| Revisiting the Global Epidemiology of Cholera in Conjunction With the Genomics of Vibrio cholerae T Ramamurthy, A Mutreja, FX Weill, B Das, A Ghosh, GB Nair Frontiers in public health 7, 203, 2019 | 109 | 2019 |
| The international and intercontinental spread and expansion of antimicrobial-resistant Salmonella Typhi: a genomic epidemiology study KE da Silva, AM Tanmoy, AK Pragasam, J Iqbal, MSI Sajib, A Mutreja, ... The Lancet Microbe 3 (8), e567-e577, 2022 | 82 | 2022 |
| Whole genome-based population biology and epidemiological surveillance of Listeria monocytogenes. Nat Microbiol 2: 16185 A Moura, A Criscuolo, H Pouseele, MM Maury, A Leclercq, C Tarr, ... | 81 | 2016 |
| Virulence Regulation and Innate Host Response in the Pathogenicity of Vibrio cholerae T Ramamurthy, RK Nandy, AK Mukhopadhyay, S Dutta, A Mutreja, ... Frontiers in Cellular and Infection Microbiology 10, 572096, 2020 | 75 | 2020 |
| Genomic epidemiology of Vibrio cholerae O1 associated with floods, Pakistan, 2010 MA Shah, A Mutreja, N Thomson, S Baker, J Parkhill, G Dougan, ... Emerging infectious diseases 20 (1), 13, 2014 | 69 | 2014 |
| Widespread epidemic cholera caused by a restricted subset of Vibrio cholerae clones S Moore, N Thomson, A Mutreja, R Piarroux Clinical Microbiology and Infection 20 (5), 373-379, 2014 | 58 | 2014 |
| First Indian report on genome-wide comparison of multidrug-resistant Escherichia coli from blood stream infections NK Devanga Ragupathi, B Veeraraghavan, DP Muthuirulandi Sethuvel, ... PLoS One 15 (2), e0220428, 2020 | 52 | 2020 |
| Antimicrobial drug resistance of Vibrio cholerae, Democratic Republic of the Congo B Miwanda, S Moore, JJ Muyembe, G Nguefack-Tsague, IK Kabangwa, ... Emerging infectious diseases 21 (5), 847, 2015 | 52 | 2015 |
| Deciphering the origin of the 2012 cholera epidemic in Guinea by integrating epidemiological and molecular analyses S Rebaudet, MA Mengel, L Koivogui, S Moore, A Mutreja, Y Kande, ... PLoS neglected tropical diseases 8 (6), e2898, 2014 | 48 | 2014 |
| A genomic island in Vibrio cholerae with VPI-1 site-specific recombination characteristics contains CRISPR-Cas and type VI secretion modules M Labbate, FD Orata, NK Petty, ND Jayatilleke, WL King, PC Kirchberger, ... Scientific reports 6 (1), 36891, 2016 | 44 | 2016 |
| A study on the geophylogeny of clinical and environmental Vibrio cholerae in Kenya J Kiiru, A Mutreja, AA Mohamed, RW Kimani, J Mwituria, RO Sanaya, ... PLoS One 8 (9), e74829, 2013 | 42 | 2013 |
| Evolutionary tracking of SARS-CoV-2 genetic variants highlights an intricate balance of stabilizing and destabilizing mutations JJ Jacob, K Vasudevan, AK Pragasam, K Gunasekaran, ... MBio 12 (4), 10.1128/mbio. 01188-21, 2021 | 41 | 2021 |
| Global diversity and antimicrobial resistance of typhoid fever pathogens: Insights from a meta-analysis of 13,000 Salmonella Typhi genomes ME Carey, ZA Dyson, DJ Ingle, A Amir, MK Aworh, MA Chattaway, ... Elife 12, e85867, 2023 | 40 | 2023 |
| Defining endemic cholera at three levels of spatiotemporal resolution within Bangladesh D Domman, F Chowdhury, AI Khan, MJ Dorman, A Mutreja, MI Uddin, ... Nature genetics 50 (7), 951-955, 2018 | 39 | 2018 |
