Marius Pachitariu

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Carsen StringerGroup Leader, HHMI Janelia Research CampusVerifierad e-postadress på janelia.hhmi.org
Kenneth HarrisUniversity College LondonVerifierad e-postadress på ucl.ac.uk
Matteo CarandiniProfessor of Visual Neuroscience, University College LondonVerifierad e-postadress på ucl.ac.uk
Nicholas A SteinmetzAssistant Professor at the University of Washington, Seattle, WAVerifierad e-postadress på uw.edu
Maneesh SahaniGatsby Unit, UCLVerifierad e-postadress på gatsby.ucl.ac.uk
Michalis MichaelosJanelia HHMIVerifierad e-postadress på hhmi.org
Mario DipoppaUniversity of California, Los Angeles (UCLA)Verifierad e-postadress på g.ucla.edu
Sylvia SchröderSir Henry Dale Fellow, Group Leader, University of SussexVerifierad e-postadress på sussex.ac.uk
Shabnam KadirUniversity of HertfordshireVerifierad e-postadress på herts.ac.uk
Charu ReddyUniversity College LondonVerifierad e-postadress på ucl.ac.uk
Tim WangAllen InstituteVerifierad e-postadress på alleninstitute.org
L. Federico RossiItalian Institute of TechnologyVerifierad e-postadress på iit.it
Nicholas A LesicaUniversity College LondonVerifierad e-postadress på ucl.ac.uk
Lin ZhongJanelia Research Campus, HHMIVerifierad e-postadress på janelia.hhmi.org
Adam RansonUniversidad Autónoma de BarcelonaVerifierad e-postadress på uab.cat
Shashwat SridharDoctoral Candidate, Gollisch Lab, Universitätsmedizin GöttingenVerifierad e-postadress på med.uni-goettingen.de
Georg KellerFriedrich Miescher Institute for Biomedical ResearchVerifierad e-postadress på fmi.ch
Adil KhanKing's College LondonVerifierad e-postadress på kcl.ac.uk
Jasper PoortUniversity of CambridgeVerifierad e-postadress på cam.ac.uk
Marius BauzaUCLVerifierad e-postadress på ucl.ac.uk

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Marius Pachitariu

HHMI Janelia

Verifierad e-postadress på hhmi.org - Startsida

Neuroscience Machine Learning


Titel Sortera efter citat Sortera efter år Sortera efter titel	Citeras av Citeras av	År
Cellpose: a generalist algorithm for cellular segmentation C Stringer, T Wang, M Michaelos, M Pachitariu Nature methods 18 (1), 100-106, 2021	2677	2021
Fully integrated silicon probes for high-density recording of neural activity JJ Jun, NA Steinmetz, JH Siegle, DJ Denman, M Bauza, B Barbarits, ... Nature 551 (7679), 232-236, 2017	2095	2017
Spontaneous behaviors drive multidimensional, brainwide activity C Stringer, M Pachitariu, N Steinmetz, CB Reddy, M Carandini, KD Harris Science 364 (6437), 255, 2019	1421	2019
Kilosort: realtime spike-sorting for extracellular electrophysiology with hundreds of channels M Pachitariu, N Steinmetz, S Kadir, M Carandini, KD Harris BioRxiv, 2016	1112*	2016
Suite2p: beyond 10,000 neurons with standard two-photon microscopy M Pachitariu, C Stringer, S Schröder, M Dipoppa, LF Rossi, M Carandini, ... BioRxiv, 061507, 2016	940	2016
Neuropixels 2.0: A miniaturized high-density probe for stable, long-term brain recordings NA Steinmetz, C Aydin, A Lebedeva, M Okun, M Pachitariu, M Bauza, ... Science 372 (6539), eabf4588, 2021	911	2021
Cellpose 2.0: how to train your own model M Pachitariu, C Stringer Nature methods 19 (12), 1634-1641, 2022	697	2022
High-dimensional geometry of population responses in visual cortex C Stringer, M Pachitariu, N Steinmetz, M Carandini, KD Harris Nature, 1, 2019	588	2019
Survey of spiking in the mouse visual system reveals functional hierarchy JH Siegle, X Jia, S Durand, S Gale, C Bennett, N Graddis, G Heller, ... Nature 592 (7852), 86-92, 2021	522*	2021
Learning enhances sensory and multiple non-sensory representations in primary visual cortex J Poort, AG Khan, M Pachitariu, A Nemri, I Orsolic, J Krupic, M Bauza, ... Neuron 86 (6), 1478-1490, 2015	459	2015
Thirst regulates motivated behavior through modulation of brainwide neural population dynamics WE Allen, MZ Chen, N Pichamoorthy, RH Tien, M Pachitariu, L Luo, ... Science 364 (6437), eaav3932, 2019	366	2019
Toroidal topology of population activity in grid cells RJ Gardner, E Hermansen, M Pachitariu, Y Burak, NA Baas, BA Dunn, ... Nature 602 (7895), 123-128, 2022	346	2022
Vision and locomotion shape the interactions between neuron types in mouse visual cortex M Dipoppa, A Ranson, M Krumin, M Pachitariu, M Carandini, KD Harris Neuron 98 (3), 602-615. e8, 2018	317	2018
Spike sorting with Kilosort4 M Pachitariu, S Sridhar, J Pennington, C Stringer Nature Methods 21 (5), 914-921, 2024	201*	2024
Robustness of spike deconvolution for neuronal calcium imaging M Pachitariu, C Stringer, KD Harris Journal of Neuroscience 38 (37), 7976-7985, 2018	192*	2018
High-precision coding in visual cortex C Stringer, M Michaelos, D Tsyboulski, SE Lindo, M Pachitariu Cell 184 (10), 2767-2778. e15, 2021	171	2021
State-dependent population coding in primary auditory cortex M Pachitariu, DR Lyamzin, M Sahani, NA Lesica Journal of Neuroscience 35 (5), 2058-2073, 2015	166	2015
Community-based benchmarking improves spike rate inference from two-photon calcium imaging data P Berens, J Freeman, T Deneux, N Chenkov, T McColgan, A Speiser, ... PLoS computational biology 14 (5), e1006157, 2018	158	2018
Computational processing of neural recordings from calcium imaging data C Stringer, M Pachitariu Current opinion in neurobiology 55, 22-31, 2019	139	2019
Arousal modulates retinal output S Schröder, NA Steinmetz, M Krumin, M Pachitariu, M Rizzi, L Lagnado, ... Neuron 107 (3), 487-495. e9, 2020	120	2020

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