Chih Hsuan Wei

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Zhiyong LuSenior Investigator, NLM; Adjunct Professor of CS, UIUCVerifierad e-postadress på nih.gov
Robert LeamanStaff Scientist, NCBI/NLM/NIHVerifierad e-postadress på nih.gov
Hung-Yu KaoNational Tsing Hua UniversityVerifierad e-postadress på cs.nthu.edu.tw
Po-Ting LaiNational Center for Biotechnology Information (NCBI)Verifierad e-postadress på ncbi.nlm.nih.gov
Ling LuoAssociate Professor, School of Computer Science and Technology, Dalian University of TechnologyVerifierad e-postadress på dlut.edu.cn
Qingyu ChenBiomedical Informatics & Data Science, Yale University; NCBI-NLM, National Institutes of HealthVerifierad e-postadress på yale.edu
Yifan PengAssociate Professor at Weill Cornell MedicineVerifierad e-postadress på med.cornell.edu
Carolyn MattinglyProfessor, Biological Sciences, North Carolina State UniversityVerifierad e-postadress på ncsu.edu
Sun KimAmazon Alexa AI; National Center for Biotechnology Information (NCBI)Verifierad e-postadress på amazon.com
Rezarta IslamajNational Library of Medicine, National Institutes ofVerifierad e-postadress på nih.gov
Kyubum LeeAmgenVerifierad e-postadress på amgen.com
Cecilia ArighiUniversity of DelawareVerifierad e-postadress på udel.edu
Ritu KhareIQVIA Data Science and Advanced AnalyticsVerifierad e-postadress på iqvia.com
Yi-Yu HsuSchool of Computing, National Cheng Kung UniversityVerifierad e-postadress på gs.ncku.edu.tw
Eva HualaPhoenix BioinformaticsVerifierad e-postadress på phoenixbioinformatics.org
Sampo PyysaloUniversity of TurkuVerifierad e-postadress på utu.fi
Filip GinterUniversity of TurkuVerifierad e-postadress på utu.fi
Yves Van de PeerProfessor in Bioinformatics and Genome Biology, Ghent University, BelgiumVerifierad e-postadress på psb.ugent.be
Sophia AnaniadouProfessor, Computer Science, Manchester University, National Centre for Text MiningVerifierad e-postadress på manchester.ac.uk
Jari BjörnePost-doctoral researcher, University of Turku, FinlandVerifierad e-postadress på utu.fi

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Chih Hsuan Wei

Staff Scientist, NCBI (National Center for Biotechnology Information) / NLM / NIH

Verifierad e-postadress på ncbi.nlm.nih.gov

Natural language processing Machine learning Deep learning BioNLP


Titel Sortera efter citat Sortera efter år Sortera efter titel	Citeras av Citeras av	År
BioCreative V CDR task corpus: a resource for chemical disease relation extraction J Li, Y Sun, RJ Johnson, D Sciaky, CH Wei, R Leaman, AP Davis, ... Database 2016, 2016	963	2016
PubTator: a web-based text mining tool for assisting biocuration CH Wei, HY Kao, Z Lu Nucleic acids research 41 (W1), W518-W522, 2013	638	2013
Assessing the state of the art in biomedical relation extraction: overview of the BioCreative V chemical-disease relation (CDR) task CH Wei, Y Peng, R Leaman, AP Davis, CJ Mattingly, J Li, TC Wiegers, ... Database 2016, baw032, 2016	443	2016
PubTator Central: Automated Concept Annotation for Biomedical Full Text Articles CH Wei, A Allot, R Leaman, Z Lu Nucleic Acids Research 47 (W1), W587–W593, 2019	409	2019
tmChem: a high performance approach for chemical named entity recognition and normalization R Leaman, CH Wei, Z Lu Journal of cheminformatics 7 (1), S3, 2015	319	2015
GNormPlus: An Integrative Approach for Tagging Genes, Gene Families, and Protein Domains CH Wei, HY Kao, Z Lu BioMed Research International 2015, 918710, 2015	251	2015
tmVar: a text mining approach for extracting sequence variants in biomedical literature CH Wei, BR Harris, HY Kao, Z Lu Bioinformatics 29 (11), 1433-1439, 2013	198	2013
The gene normalization task in BioCreative III Z Lu, HY Kao, CH Wei, M Huang, J Liu, CJ Kuo, CN Hsu, RTH Tsai, ... BMC bioinformatics 12 (8), S2, 2011	173	2011
LitVar: a semantic search engine for linking genomic variant data in PubMed and PMC A Allot, Y Peng, CH Wei, K Lee, L Phan, Z Lu Nucleic acids research 46 (W1), W530-W536, 2018	142	2018
Large-scale event extraction from literature with multi-level gene normalization S Van Landeghem, J Björne, CH Wei, K Hakala, S Pyysalo, S Ananiadou, ... PloS one 8 (4), e55814, 2013	134	2013
BioRED: a rich biomedical relation extraction dataset L Luo, PT Lai, CH Wei, CN Arighi, Z Lu Briefings in Bioinformatics, bbac282, 2022	133	2022
On expert curation and scalability: UniProtKB/Swiss-Prot as a case study S Poux, CN Arighi, M Magrane, A Bateman, CH Wei, Z Lu, E Boutet, ... Bioinformatics 33 (21), 3454-3460, 2017	128	2017
SR4GN: a species recognition software tool for gene normalization CH Wei, HY Kao, Z Lu PloS one 7 (6), e38460, 2012	115	2012
Cross-species gene normalization by species inference CH Wei, HY Kao BMC bioinformatics 12 (8), S5, 2011	110	2011
tmVar 2.0: Integrating genomic variant information from literature with dbSNP and ClinVar for precision medicine CH Wei, L Phan, J Feltz, R Maiti, T Hefferon, Z Lu Bioinformatics, btx541, 2017	106	2017
Accelerating literature curation with text-mining tools: a case study of using PubTator to curate genes in PubMed abstracts CH Wei, BR Harris, D Li, TZ Berardini, E Huala, HY Kao, Z Lu Database 2012, bas041, 2012	103	2012
Improving chemical disease relation extraction with rich features and weakly labeled data Y Peng, CH Wei, Z Lu Journal of Cheminformatics 8 (1), 53, 2016	92	2016
Annotating chemicals, diseases, and their interactions in biomedical literature J Li, Y Sun, R Johnson, D Sciaky, CH Wei, R Leaman, AP Davis, ... Proceedings of the fifth BioCreative challenge evaluation workshop, 173-182, 2015	92	2015
An overview of the BioCreative 2012 Workshop Track III: interactive text mining task CN Arighi, B Carterette, KB Cohen, M Krallinger, WJ Wilbur, P Fey, ... Database 2013, bas056, 2013	86	2013
Artificial intelligence in action: addressing the COVID-19 pandemic with natural language processing Q Chen, R Leaman, A Allot, L Luo, CH Wei, S Yan, Z Lu Annual review of biomedical data science 4 (1), 313-339, 2021	77	2021

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