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Joana Damas
Joana Damas
Manager, Computational Biology @ Form Bio LLC
Verifierad e-postadress på formbio.com - Startsida
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Towards complete and error-free genome assemblies of all vertebrate species
A Rhie, SA McCarthy, O Fedrigo, J Damas, G Formenti, S Koren, ...
Nature 592 (7856), 737-746, 2021
22032021
Broad host range of SARS-CoV-2 predicted by comparative and structural analysis of ACE2 in vertebrates. bioRxiv, 2020.04. 16.045302
J Damas, GM Hughes, KC Keough, CA Painter, NS Persky, M Corbo, ...
685*2020
A comparative genomics multitool for scientific discovery and conservation
Nature 587 (7833), 240-245, 2020
2992020
Evolutionary constraint and innovation across hundreds of placental mammals
MJ Christmas, IM Kaplow, DP Genereux, MX Dong, GM Hughes, X Li, ...
Science 380 (6643), eabn3943, 2023
1622023
Platypus and echidna genomes reveal mammalian biology and evolution
Y Zhou, L Shearwin-Whyatt, J Li, Z Song, T Hayakawa, D Stevens, ...
Nature 592 (7856), 756-762, 2021
1392021
Upgrading short-read animal genome assemblies to chromosome level using comparative genomics and a universal probe set
J Damas, R O'Connor, M Farré, VPE Lenis, HJ Martell, A Mandawala, ...
Genome research 27 (5), 875-884, 2017
1242017
Chromosome segregation is biased by kinetochore size
D Drpic, AC Almeida, P Aguiar, F Renda, J Damas, HA Lewin, DM Larkin, ...
Current Biology 28 (9), 1344-1356. e5, 2018
1212018
Association of G-quadruplex forming sequences with human mtDNA deletion breakpoints
DW Dong, F Pereira, SP Barrett, JE Kolesar, K Cao, J Damas, ...
BMC genomics 15, 1-15, 2014
1162014
Third Report on Chicken Genes and Chromosomes 2015Prepared by
M Schmid, J Smith, DW Burt, BL Aken, PB Antin, AL Archibald, C Ashwell, ...
Cytogenetic and genome research 145 (2), 78-179, 2015
992015
Integrating gene annotation with orthology inference at scale
BM Kirilenko, C Munegowda, E Osipova, D Jebb, V Sharma, M Blumer, ...
Science 380 (6643), eabn3107, 2023
922023
Mitochondrial DNA rearrangements in health and disease—a comprehensive study
J Damas, DC Samuels, J Carneiro, A Amorim, F Pereira
Human mutation 35 (1), 1-14, 2014
922014
Digital PCR methods improve detection sensitivity and measurement precision of low abundance mtDNA deletions
FR Belmonte, JL Martin, K Frescura, J Damas, F Pereira, MA Tarnopolsky, ...
Scientific reports 6 (1), 25186, 2016
902016
A genomic timescale for placental mammal evolution
NM Foley, VC Mason, AJ Harris, KR Bredemeyer, J Damas, HA Lewin, ...
Science 380 (6643), eabl8189, 2023
892023
Mitochondrial DNA deletions are associated with non-B DNA conformations
J Damas, J Carneiro, J Goncalves, JB Stewart, DC Samuels, A Amorim, ...
Nucleic acids research 40 (16), 7606-7621, 2012
852012
Novel insights into chromosome evolution in birds, archosaurs, and reptiles
M Farre, J Narayan, GT Slavov, J Damas, L Auvil, C Li, ED Jarvis, DW Burt, ...
Genome biology and evolution 8 (8), 2442-2451, 2016
812016
Leveraging base-pair mammalian constraint to understand genetic variation and human disease
PF Sullivan, JRS Meadows, S Gazal, BDN Phan, X Li, DP Genereux, ...
Science 380 (6643), eabn2937, 2023
762023
Reconstruction of the diapsid ancestral genome permits chromosome evolution tracing in avian and non-avian dinosaurs
RE O’Connor, MN Romanov, LG Kiazim, PM Barrett, M Farré, J Damas, ...
Nature communications 9 (1), 1883, 2018
762018
Reconstruction of avian ancestral karyotypes reveals differences in the evolutionary history of macro-and microchromosomes
J Damas, J Kim, M Farré, DK Griffin, DM Larkin
Genome biology 19, 1-16, 2018
732018
MitoBreak: the mitochondrial DNA breakpoints database
J Damas, J Carneiro, A Amorim, F Pereira
Nucleic acids research 42 (D1), D1261-D1268, 2014
732014
Chromosome-level assembly reveals extensive rearrangement in saker falcon and budgerigar, but not ostrich, genomes
RE O’Connor, M Farré, S Joseph, J Damas, L Kiazim, R Jennings, ...
Genome Biology 19, 1-15, 2018
712018
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Artiklar 1–20