| Differential abundance analysis for microbial marker-gene surveys JN Paulson, OC Stine, HC Bravo, M Pop Nature Methods 10 (12), 1200-1202, 2013 | 2349 | 2013 |
| Multivariable association discovery in population-scale meta-omics studies H Mallick, A Rahnavard, LJ McIver, S Ma, Y Zhang, LH Nguyen, TL Tickle, ... PLoS computational biology 17 (11), e1009442, 2021 | 1459 | 2021 |
| Bioinformatics AD Baxevanis, GD Bader, DS Wishart John Wiley & Sons, 2020 | 1136 | 2020 |
| A reference map of the human binary protein interactome K Luck, DK Kim, L Lambourne, K Spirohn, BE Begg, W Bian, R Brignall, ... Nature 580 (7803), 402-408, 2020 | 1109 | 2020 |
| Pathogen-induced activation of disease-suppressive functions in the endophytic root microbiome VJ Carrión, J Perez-Jaramillo, V Cordovez, V Tracanna, M De Hollander, ... Science 366 (6465), 606-612, 2019 | 849 | 2019 |
| Polatuzumab vedotin in relapsed or refractory diffuse large B-cell lymphoma LH Sehn, AF Herrera, CR Flowers, MK Kamdar, A McMillan, M Hertzberg, ... Journal of Clinical Oncology 38 (2), 155-165, 2020 | 798 | 2020 |
| Simplified and representative bacterial community of maize roots B Niu, JN Paulson, X Zheng, R Kolter Proceedings of the National Academy of Sciences 114 (12), E2450-E2459, 2017 | 634 | 2017 |
| Understanding Tissue-Specific Gene Regulation AR Sonawane, J Platig, M Fagny, CY Chen, JN Paulson, ... Cell Reports 21 (4), 1077-1088, 2017 | 434 | 2017 |
| Sex differences in gene expression and regulatory networks across 29 human tissues CM Lopes-Ramos, CY Chen, ML Kuijjer, JN Paulson, AR Sonawane, ... Cell reports 31 (12), 2020 | 330 | 2020 |
| Diarrhea in young children from low-income countries leads to large-scale alterations in intestinal microbiota composition M Pop, AW Walker, J Paulson, B Lindsay, M Antonio, MA Hossain, ... Genome biology 15, 1-12, 2014 | 286 | 2014 |
| Dynamic metabolic exchange governs a marine algal-bacterial interaction E Segev, TP Wyche, KH Kim, J Petersen, C Ellebrandt, H Vlamakis, ... eLife 5, e17473, 2016 | 261 | 2016 |
| metagenomeSeq: Statistical analysis for sparse high-throughput sequencing JN Paulson, M Pop, HC Bravo | 251* | 2021 |
| Smooth Quantile Normalization SC Hicks, K Okrah, JN Paulson, J Quackenbush, RA Irizarry, HC Bravo Biostatistics 19 (2), 185–198, 2018 | 119 | 2018 |
| Exploring regulation in tissues with eQTL networks M Fagny, JN Paulson, ML Kuijjer, AR Sonawane, CY Chen, ... Proceedings of the National Academy of Sciences 114 (37), E7841-E7850, 2017 | 104 | 2017 |
| Disentangling the genetic basis of rhizosphere microbiome assembly in tomato BO Oyserman, SS Flores, T Griffioen, X Pan, E Van Der Wijk, L Pronk, ... Nature communications 13 (1), 3228, 2022 | 89 | 2022 |
| Cancer subtype identification using somatic mutation data ML Kuijjer, JN Paulson, P Salzman, W Ding, J Quackenbush British journal of cancer 118 (11), 1492-1501, 2018 | 83 | 2018 |
| Transcriptomic profiles and 5-year results from the randomized CLL14 study of venetoclax plus obinutuzumab versus chlorambucil plus obinutuzumab in chronic lymphocytic leukemia O Al-Sawaf, C Zhang, HY Jin, S Robrecht, Y Choi, S Balasubramanian, ... Nature communications 14 (1), 2147, 2023 | 76 | 2023 |
| Individual-specific changes in the human gut microbiota after challenge with enterotoxigenic Escherichia coli and subsequent ciprofloxacin treatment M Pop, JN Paulson, S Chakraborty, I Astrovskaya, BR Lindsay, S Li, ... BMC genomics 17, 1-11, 2016 | 76 | 2016 |
| Regulatory network changes between cell lines and their tissues of origin CM Lopes-Ramos, JN Paulson, CY Sonawane, ML Kuijjer, M Fagny, ... BMC genomics 18 (1), 723, 2017 | 66 | 2017 |
| Conventional wastewater treatment and reuse site practices modify bacterial community structure but do not eliminate some opportunistic pathogens in reclaimed water P Kulkarni, ND Olson, JN Paulson, M Pop, C Maddox, E Claye, ... Science of the Total Environment 639, 1126-1137, 2018 | 65 | 2018 |
Hector Corrada BravoAssociate Professor of Computer Science, University of MarylandVerifierad e-postadress på umiacs.umd.edu